RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 MRPL51Q4U2R6 128 aaKnown RBP0.66□□□□□ -2.3
COMMD3-211ENST00000472673 CENPWQ5EE01 88 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 FAM201AQ5SY85 155 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 HENMT1Q5T8I9 393 aaKnown RBP0.66□□□□□ -2.3
COMMD3-211ENST00000472673 RASL11AQ6T310 242 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 ANGPTL6Q8NI99 470 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 LRRC20Q8TCA0 184 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 DTD1Q8TEA8 209 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 MGLLQ99685 303 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 UPK3BQ9BT76 320 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 GTSF1LQ9H1H1 148 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 DMAC2Q9NW81 257 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 PRO2289Q9P1D8 64 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 DSCAML1Q8TD84 2053 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 MYO5BQ9ULV0 1848 aa0.66□□□□□ -2.3
COMMD3-211ENST00000472673 ADAMTSL1Q8N6G6 1762 aa0.65□□□□□ -2.3
COMMD3-211ENST00000472673 PLCH2O75038 1416 aa0.65□□□□□ -2.3
COMMD3-211ENST00000472673 MDFIC2A0A1B0GVS7 189 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 BOLA2-SMG1P6H3BVE0 249 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 SNAP29O95721 258 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 PRB4P10163 310 aaPredicted RBP0.65□□□□□ -2.31
COMMD3-211ENST00000472673 SLC25A16P16260 332 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 RCVRNP35243 200 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 SLC35A2P78381 396 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 RAB31Q13636 194 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 UAP1Q16222 522 aaPredicted RBP0.65□□□□□ -2.31
COMMD3-211ENST00000472673 TRMT12Q53H54 448 aaKnown RBP0.65□□□□□ -2.31
COMMD3-211ENST00000472673 XKRXQ6PP77 449 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 AGTRAPQ6RW13 159 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 C2orf91Q6ZV80 131 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 NAA40Q86UY6 237 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 SPACA4Q8TDM5 124 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 FGF13Q92913 245 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 CIDECQ96AQ7 238 aaPredicted RBP0.65□□□□□ -2.31
COMMD3-211ENST00000472673 MED18Q9BUE0 208 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 ZNF426Q9BUY5 554 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 C1QTNF6Q9BXI9 259 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 MAT2BQ9NZL9 334 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 MRM2Q9UI43 246 aaKnown RBP0.65□□□□□ -2.31
COMMD3-211ENST00000472673 POFUT2Q9Y2G5 429 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 RAB3GAP2Q9H2M9 1393 aa0.65□□□□□ -2.31
COMMD3-211ENST00000472673 A0A1B0GX12 115 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 DHRS12A0PJE2 317 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 C11orf86A6NJI1 115 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 EFCAB9A8MZ26 197 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 TNFAIP8O95379 198 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 LDOC1O95751 146 aaPredicted RBP0.64□□□□□ -2.31
COMMD3-211ENST00000472673 ASS1P00966 412 aaKnown RBP0.64□□□□□ -2.31
COMMD3-211ENST00000472673 CST4P01036 141 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 CCDC172P0C7W6 258 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 IGHV3-30-3P0DP02 117 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 CCL2P13500 99 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 ATF1P18846 271 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 GADD45AP24522 165 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 PSMB3P49720 205 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 PSMD7P51665 324 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 TSPEAR-AS2P59090 65 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 C1QTNF8P60827 252 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 FLOT2Q14254 428 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 PAFAH1B3Q15102 231 aaKnown RBP0.64□□□□□ -2.31
COMMD3-211ENST00000472673 LRRC6Q86X45 466 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 SLC35F6Q8N357 371 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 ZNF283Q8N7M2 679 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 TMEM75Q8N9X5 138 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 TMEM239Q8WW34 195 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 CCDC127Q96BQ5 260 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 TBX5Q99593 518 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 CDCA4Q9BXL8 241 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 GOLPH3Q9H4A6 298 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 C11orf1Q9H5F2 150 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 BABAM2Q9NXR7 383 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 MRPS16Q9Y3D3 137 aaKnown RBP0.64□□□□□ -2.31
COMMD3-211ENST00000472673 FIS1Q9Y3D6 152 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 PUS1Q9Y606 427 aaKnown RBP eCLIP0.64□□□□□ -2.31
COMMD3-211ENST00000472673 ROS1P08922 2347 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 KIAA2026Q5HYC2 2103 aa0.64□□□□□ -2.31
COMMD3-211ENST00000472673 IGHV3-15A0A0B4J1V0 119 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 SULT1C2O00338 296 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 CRXO43186 299 aaPredicted RBP0.63□□□□□ -2.31
COMMD3-211ENST00000472673 ZW10O43264 779 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 SGCEO43556 437 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 ZNF705DP0CH99 300 aaPredicted RBP0.63□□□□□ -2.31
COMMD3-211ENST00000472673 ZNF705BP0CI00 300 aaPredicted RBP0.63□□□□□ -2.31
COMMD3-211ENST00000472673 UGT2B10P36537 528 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 SERPINB10P48595 397 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 STX3Q13277 289 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 TMEM31Q5JXX7 168 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 Q6ZTI0 123 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 GLT6D1Q7Z4J2 308 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 MRPL52Q86TS9 123 aaKnown RBP0.63□□□□□ -2.31
COMMD3-211ENST00000472673 ST13P4Q8IZP2 240 aaPredicted RBP0.63□□□□□ -2.31
COMMD3-211ENST00000472673 ACBD4Q8NC06 268 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 OR4P4Q8NGL7 312 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 TRNT1Q96Q11 434 aaKnown RBP0.63□□□□□ -2.31
COMMD3-211ENST00000472673 CHST5Q9GZS9 411 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 METTL8Q9H825 291 aaKnown RBP0.63□□□□□ -2.31
COMMD3-211ENST00000472673 DNAJC12Q9UKB3 198 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 SOX21Q9Y651 276 aaPredicted RBP0.63□□□□□ -2.31
COMMD3-211ENST00000472673 ALG5Q9Y673 324 aa0.63□□□□□ -2.31
COMMD3-211ENST00000472673 NUMA1Q14980 2115 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms