RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 FAM71E2Q8N5Q1 922 aa16.52■□□□□ 0.24
SREBF1-210ENST00000471445 COMMD1Q8N668 190 aa16.52■□□□□ 0.24
SREBF1-210ENST00000471445 GALMQ96C23 342 aa16.52■□□□□ 0.24
SREBF1-210ENST00000471445 CNBD2Q96M20 576 aa16.52■□□□□ 0.24
SREBF1-210ENST00000471445 S1PR3Q99500 378 aa16.52■□□□□ 0.24
SREBF1-210ENST00000471445 PLGRKTQ9HBL7 147 aa16.52■□□□□ 0.24
SREBF1-210ENST00000471445 AK6Q9Y3D8 172 aaKnown RBP16.52■□□□□ 0.24
SREBF1-210ENST00000471445 LRRC42Q9Y546 428 aa16.52■□□□□ 0.24
SREBF1-210ENST00000471445 LINC01548A6NM66 108 aa16.51■□□□□ 0.23
SREBF1-210ENST00000471445 FOXI3A8MTJ6 420 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-210ENST00000471445 AP4M1O00189 453 aa16.51■□□□□ 0.23
SREBF1-210ENST00000471445 RGS11O94810 467 aa16.51■□□□□ 0.23
SREBF1-210ENST00000471445 PRB2P02812 416 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-210ENST00000471445 SLC35B1P78383 322 aa16.51■□□□□ 0.23
SREBF1-210ENST00000471445 P2RY14Q15391 338 aa16.51■□□□□ 0.23
SREBF1-210ENST00000471445 ETV3LQ6ZN32 361 aa16.51■□□□□ 0.23
SREBF1-210ENST00000471445 MOB1BQ7L9L4 216 aa16.51■□□□□ 0.23
SREBF1-210ENST00000471445 ZNF367Q7RTV3 350 aa16.51■□□□□ 0.23
SREBF1-210ENST00000471445 RBMXL1Q96E39 390 aaKnown RBP16.51■□□□□ 0.23
SREBF1-210ENST00000471445 URM1Q9BTM9 101 aaKnown RBP16.51■□□□□ 0.23
SREBF1-210ENST00000471445 NECAP2Q9NVZ3 263 aa16.51■□□□□ 0.23
SREBF1-210ENST00000471445 BLOC1S6Q9UL45 172 aa16.51■□□□□ 0.23
SREBF1-210ENST00000471445 TRBV6-6A0A0A6YYG2 114 aa16.5■□□□□ 0.23
SREBF1-210ENST00000471445 IGLL1P15814 213 aa16.5■□□□□ 0.23
SREBF1-210ENST00000471445 ARSBP15848 533 aa16.5■□□□□ 0.23
SREBF1-210ENST00000471445 CALRP27797 417 aaKnown RBP16.5■□□□□ 0.23
SREBF1-210ENST00000471445 ZNF833PQ6ZTB9 187 aa16.5■□□□□ 0.23
SREBF1-210ENST00000471445 FAM89BQ8N5H3 189 aa16.5■□□□□ 0.23
SREBF1-210ENST00000471445 MRPL20Q9BYC9 149 aaKnown RBP16.5■□□□□ 0.23
SREBF1-210ENST00000471445 IFI27L2Q9H2X8 130 aa16.5■□□□□ 0.23
SREBF1-210ENST00000471445 PLEKHJ1Q9NW61 149 aa16.5■□□□□ 0.23
SREBF1-210ENST00000471445 ABRACLQ9P1F3 81 aa16.5■□□□□ 0.23
SREBF1-210ENST00000471445 SOCS1O15524 211 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 F2RL1P55085 397 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 RAB11BQ15907 218 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 SSX1Q16384 188 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 FAM71F2Q6NXP2 309 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 LINC00482Q8N8I6 264 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 OR51D1Q8NGF3 324 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 RASL11BQ9BPW5 248 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 NABP2Q9BQ15 211 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 HSPB9Q9BQS6 159 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 CHMP1AQ9HD42 196 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-210ENST00000471445 ACOT13Q9NPJ3 140 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 ZFP57Q9NU63 452 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 AK3Q9UIJ7 227 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 RAB26Q9ULW5 256 aa16.49■□□□□ 0.23
SREBF1-210ENST00000471445 SAA2-SAA4A0A096LPE2 208 aa16.48■□□□□ 0.23
SREBF1-210ENST00000471445 SAA2P0DJI9 122 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-210ENST00000471445 SLC6A1P30531 599 aa16.48■□□□□ 0.23
SREBF1-210ENST00000471445 FOXB2Q5VYV0 432 aa16.48■□□□□ 0.23
SREBF1-210ENST00000471445 C18orf65Q6ZTR6 163 aa16.48■□□□□ 0.23
SREBF1-210ENST00000471445 OR2AK2Q8NG84 335 aa16.48■□□□□ 0.23
SREBF1-210ENST00000471445 RCC1LQ96I51 464 aaKnown RBP16.48■□□□□ 0.23
SREBF1-210ENST00000471445 HDHD3Q9BSH5 251 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-210ENST00000471445 RIMS4Q9H426 269 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-210ENST00000471445 AURKAIP1Q9NWT8 199 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-210ENST00000471445 ZNF580Q9UK33 172 aa16.48■□□□□ 0.23
SREBF1-210ENST00000471445 HSF4Q9ULV5 492 aa16.48■□□□□ 0.23
SREBF1-210ENST00000471445 LDLRAD4O15165 306 aa16.47■□□□□ 0.23
SREBF1-210ENST00000471445 CLDN12P56749 244 aa16.47■□□□□ 0.23
SREBF1-210ENST00000471445 HLA-DRB3P79483 266 aa16.47■□□□□ 0.23
SREBF1-210ENST00000471445 MMDQ15546 238 aa16.47■□□□□ 0.23
SREBF1-210ENST00000471445 IL1F10Q8WWZ1 152 aa16.47■□□□□ 0.23
SREBF1-210ENST00000471445 GON7Q9BXV9 100 aa16.47■□□□□ 0.23
SREBF1-210ENST00000471445 STEAP1Q9UHE8 339 aa16.47■□□□□ 0.23
SREBF1-210ENST00000471445 V9GY05 133 aa16.47■□□□□ 0.23
SREBF1-210ENST00000471445 ST8SIA5O15466 376 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 RRP9O43818 475 aaKnown RBP16.46■□□□□ 0.23
SREBF1-210ENST00000471445 DUS4LO95620 317 aaKnown RBP16.46■□□□□ 0.23
SREBF1-210ENST00000471445 SOX6P35712 828 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 OR3A3P47888 321 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 THBS3P49746 956 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 TMEM50BP56557 158 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 GABARAPL2P60520 117 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 CFHR3Q02985 330 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 TEX38Q6PEX7 206 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 C8orf86Q6ZUL3 223 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 MRPL41Q8IXM3 137 aaKnown RBP16.46■□□□□ 0.23
SREBF1-210ENST00000471445 SETD6Q8TBK2 473 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 FAM3DQ96BQ1 224 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 ZNF251Q9BRH9 671 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 C12orf4Q9NQ89 552 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 NDUFB11Q9NX14 153 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 PIPOXQ9P0Z9 390 aa16.46■□□□□ 0.23
SREBF1-210ENST00000471445 SHISA3A0PJX4 238 aa16.45■□□□□ 0.22
SREBF1-210ENST00000471445 ITGB1BP1O14713 200 aa16.45■□□□□ 0.22
SREBF1-210ENST00000471445 RANBP1P43487 201 aa16.45■□□□□ 0.22
SREBF1-210ENST00000471445 VEGFCP49767 419 aa16.45■□□□□ 0.22
SREBF1-210ENST00000471445 ACTBP60709 375 aa16.45■□□□□ 0.22
SREBF1-210ENST00000471445 PNLIPRP3Q17RR3 467 aa16.45■□□□□ 0.22
SREBF1-210ENST00000471445 CD200R1LQ6Q8B3 271 aa16.45■□□□□ 0.22
SREBF1-210ENST00000471445 RNF152Q8N8N0 203 aa16.45■□□□□ 0.22
SREBF1-210ENST00000471445 KLHL30-AS1Q8NEE0 82 aa16.45■□□□□ 0.22
SREBF1-210ENST00000471445 ARHGAP5-AS1Q96IT6 56 aa16.45■□□□□ 0.22
SREBF1-210ENST00000471445 PARP12Q9H0J9 701 aaKnown RBP16.45■□□□□ 0.22
SREBF1-210ENST00000471445 SLC23A1Q9UHI7 598 aa16.45■□□□□ 0.22
SREBF1-210ENST00000471445 ZNF107Q9UII5 783 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-210ENST00000471445 MGAT4AQ9UM21 535 aa16.45■□□□□ 0.22
SREBF1-210ENST00000471445 NUDT19A8MXV4 375 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 235.2 ms