RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 CEACAM6P40199 344 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 NOVA1P51513 510 aaKnown RBP6.75□□□□□ -1.33
SMC4-212ENST00000470240 PMP22Q01453 160 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 VASH2Q86V25 355 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 TMEM217Q8N7C4 229 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 ZNF645Q8N7E2 425 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 FDCSPQ8NFU4 85 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 KLF14Q8TD94 323 aaPredicted RBP6.75□□□□□ -1.33
SMC4-212ENST00000470240 FAM168AQ92567 244 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 C14orf79Q96F83 325 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 CIB3Q96Q77 187 aaPredicted RBP6.75□□□□□ -1.33
SMC4-212ENST00000470240 TAAR6Q96RI8 345 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 PSMG3Q9BT73 122 aaPredicted RBP6.75□□□□□ -1.33
SMC4-212ENST00000470240 KRTAP9-2Q9BYQ4 174 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 SH3BGRL3Q9H299 93 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 SAV1Q9H4B6 383 aaPredicted RBP6.75□□□□□ -1.33
SMC4-212ENST00000470240 C11orf1Q9H5F2 150 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 TUBA4BQ9H853 241 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 COA4Q9NYJ1 87 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 OR1A1Q9P1Q5 309 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 ZDHHC8Q9ULC8 765 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 FBXO7Q9Y3I1 522 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 MMP24Q9Y5R2 645 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 RANBP2P49792 3224 aaKnown RBP6.75□□□□□ -1.33
SMC4-212ENST00000470240 CNTRLQ7Z7A1 2325 aa6.75□□□□□ -1.33
SMC4-212ENST00000470240 RTTNQ86VV8 2226 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 FREM1Q5H8C1 2179 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 A0A1W2PR80 420 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 NKX2-8O15522 239 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 ZNHIT1O43257 154 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 TXNL1O43396 289 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 NXPH3O95157 252 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 IGKV3-15P01624 115 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 HSPB1P04792 205 aaKnown RBP6.74□□□□□ -1.33
SMC4-212ENST00000470240 IFNA4P05014 189 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 SNRNP70P08621 437 aaKnown RBP6.74□□□□□ -1.33
SMC4-212ENST00000470240 CELA3BP08861 270 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 OR8U8P0C7N1 319 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 LMO1P25800 156 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 GABRA2P47869 451 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 ID4P47928 161 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 RAB13P51153 203 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 PSG7Q13046 419 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 ATP6V1FQ16864 119 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 RNF212Q495C1 297 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 ACSF3Q4G176 576 aaPredicted RBP6.74□□□□□ -1.33
SMC4-212ENST00000470240 AWAT1Q58HT5 328 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 MBNL2Q5VZF2 373 aaKnown RBP6.74□□□□□ -1.33
SMC4-212ENST00000470240 IGFL2Q6UWQ7 119 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 BHLHA15Q7RTS1 189 aaPredicted RBP6.74□□□□□ -1.33
SMC4-212ENST00000470240 FAM169BQ8N8A8 192 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 DEFB124Q8NES8 71 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 PLPPR1Q8TBJ4 325 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 PINX1Q96BK5 328 aaKnown RBP6.74□□□□□ -1.33
SMC4-212ENST00000470240 BSCL2Q96G97 398 aaPredicted RBP6.74□□□□□ -1.33
SMC4-212ENST00000470240 EAF1Q96JC9 268 aaPredicted RBP6.74□□□□□ -1.33
SMC4-212ENST00000470240 PARD6GQ9BYG4 376 aaPredicted RBP6.74□□□□□ -1.33
SMC4-212ENST00000470240 HES4Q9HCC6 221 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 DNAJC13O75165 2243 aa6.74□□□□□ -1.33
SMC4-212ENST00000470240 A0A1B0GV50 99 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 C7orf77A4D0Y5 90 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.73□□□□□ -1.33
SMC4-212ENST00000470240 FAM157AC9JC47 383 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 PROB1E7EW31 1015 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 RBMXL2O75526 392 aaKnown RBP6.73□□□□□ -1.33
SMC4-212ENST00000470240 CLDN1O95832 211 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 MBP02144 154 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 ADH4P08319 380 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 IAPPP10997 89 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 PTAFRP25105 342 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 PPP1CCP36873 323 aaKnown RBP6.73□□□□□ -1.33
SMC4-212ENST00000470240 TAGLN2P37802 199 aaKnown RBP6.73□□□□□ -1.33
SMC4-212ENST00000470240 OR3A1P47881 315 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 ASCL1P50553 236 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 AKR1D1P51857 326 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 SELENOVP59797 346 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 ERVS71-1P61550 626 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 RPS23P62266 143 aaKnown RBP6.73□□□□□ -1.33
SMC4-212ENST00000470240 RPP30P78346 268 aaKnown RBP6.73□□□□□ -1.33
SMC4-212ENST00000470240 SERF2P84101 59 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 TMEM267Q0VDI3 215 aaPredicted RBP6.73□□□□□ -1.33
SMC4-212ENST00000470240 GUSBP1Q15486 140 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 TESK1Q15569 626 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 DEFB109BQ30KR1 87 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 KHDC3LQ587J8 217 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 KRBOX4Q5JUW0 171 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 ZNF66Q6ZN08 573 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 ACP7Q6ZNF0 438 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 CXorf67Q86X51 503 aaPredicted RBP6.73□□□□□ -1.33
SMC4-212ENST00000470240 FAM90A1Q86YD7 464 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 THNSL2Q86YJ6 484 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 ZNF561Q8N587 486 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 DRAM1Q8N682 238 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 RXFP4Q8TDU9 374 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 SFT2D1Q8WV19 159 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 TCTEX1D2Q8WW35 142 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 LURAP1Q96LR2 239 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 HSD17B10Q99714 261 aaKnown RBP6.73□□□□□ -1.33
SMC4-212ENST00000470240 NIPSNAP3BQ9BS92 247 aa6.73□□□□□ -1.33
SMC4-212ENST00000470240 OR2D2Q9H210 308 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms