RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 RIBC2Q9H4K1 309 aa6.94□□□□□ -1.3
CCDC171-204ENST00000470191 OR2S2Q9NQN1 319 aa6.94□□□□□ -1.3
CCDC171-204ENST00000470191 ETAA1Q9NY74 926 aa6.94□□□□□ -1.3
CCDC171-204ENST00000470191 TAS2R4Q9NYW5 299 aa6.94□□□□□ -1.3
CCDC171-204ENST00000470191 NUBP2Q9Y5Y2 271 aa6.94□□□□□ -1.3
CCDC171-204ENST00000470191 G3V2T6 193 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 SLC16A6O15403 523 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 DEDDO75618 318 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 TPPPO94811 219 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 RPSAP08865 295 aaKnown RBP6.93□□□□□ -1.3
CCDC171-204ENST00000470191 CD40LGP29965 261 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 CCR9P51686 369 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 DYRK1AQ13627 763 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 FLOT2Q14254 428 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 MORN2Q502X0 79 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 ZNF660Q6AZW8 331 aaPredicted RBP6.93□□□□□ -1.3
CCDC171-204ENST00000470191 GLDNQ6ZMI3 551 aaPredicted RBP6.93□□□□□ -1.3
CCDC171-204ENST00000470191 KCTD20Q7Z5Y7 419 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 LHFPL3Q86UP9 236 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 ODF3L1Q8IXM7 274 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 NPBQ8NG41 125 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 OR5T1Q8NG75 326 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 OR9G4Q8NGQ1 327 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 OR5AK2Q8NH90 309 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 RFKQ969G6 155 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 NRBF2Q96F24 287 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 CPNE2Q96FN4 548 aaPredicted RBP6.93□□□□□ -1.3
CCDC171-204ENST00000470191 PDCD1LG2Q9BQ51 273 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 ABHD14AQ9BUJ0 271 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 RANGRFQ9HD47 186 aaPredicted RBP6.93□□□□□ -1.3
CCDC171-204ENST00000470191 SELENOKQ9Y6D0 94 aa6.93□□□□□ -1.3
CCDC171-204ENST00000470191 UBE2QL1A1L167 161 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 A6NJY4 79 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 MCRIP1C9JLW8 97 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 H7C2Y5 167 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 RRHO14718 337 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 NDUFA3O95167 84 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 CNIH1O95406 144 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 GSTP1P09211 210 aaKnown RBP6.92□□□□□ -1.3
CCDC171-204ENST00000470191 CD7P09564 240 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 ZP3P21754 424 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 CRIP2P52943 208 aaPredicted RBP6.92□□□□□ -1.3
CCDC171-204ENST00000470191 GYS2P54840 703 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 Q3ZCU0 254 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 SLC22A6Q4U2R8 563 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 C6orf183Q5T699 404 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 KDM4DQ6B0I6 523 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 PYHIN1Q6K0P9 492 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 IL34Q6ZMJ4 242 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 Q8N402 240 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 PARP16Q8N5Y8 322 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 TCTEX1D1Q8N7M0 179 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 GRPEL2Q8TAA5 225 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 RGP1Q92546 391 aaPredicted RBP6.92□□□□□ -1.3
CCDC171-204ENST00000470191 ORAI1Q96D31 301 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 CIB1Q99828 191 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 NEURL2Q9BR09 285 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 THAP7Q9BT49 309 aaPredicted RBP6.92□□□□□ -1.3
CCDC171-204ENST00000470191 SRD5A3Q9H8P0 318 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 ISG20L2Q9H9L3 353 aaKnown RBP6.92□□□□□ -1.3
CCDC171-204ENST00000470191 TAF9BQ9HBM6 251 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 RAB9BQ9NP90 201 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 RNF150Q9ULK6 438 aa6.92□□□□□ -1.3
CCDC171-204ENST00000470191 HERC2O95714 4834 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 SAA2-SAA4A0A096LPE2 208 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 E9PI62 339 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 ARPC1BO15143 372 aaKnown RBP6.91□□□□□ -1.3
CCDC171-204ENST00000470191 CA2P00918 260 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 TRBV12-3P01733 135 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 MAS1P04201 325 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 CSN3P07498 182 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 SAA2P0DJI9 122 aaPredicted RBP6.91□□□□□ -1.3
CCDC171-204ENST00000470191 GNGT1P63211 74 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 KLF5Q13887 457 aaPredicted RBP6.91□□□□□ -1.3
CCDC171-204ENST00000470191 GUCA2BQ16661 112 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 MPV17LQ2QL34 196 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 DDI2Q5TDH0 399 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 RAB12Q6IQ22 244 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 CD200R1LQ6Q8B3 271 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 ASCL4Q6XD76 172 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 LINC00322Q6ZN03 302 aaPredicted RBP6.91□□□□□ -1.3
CCDC171-204ENST00000470191 AMIGO2Q86SJ2 522 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 OR8J1Q8NGP2 316 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 SLA2Q9H6Q3 261 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 IFT22Q9H7X7 185 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 METTL1Q9UBP6 276 aaKnown RBP6.91□□□□□ -1.3
CCDC171-204ENST00000470191 AASSQ9UDR5 926 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 PEX16Q9Y5Y5 336 aa6.91□□□□□ -1.3
CCDC171-204ENST00000470191 TCRBV3S1A0A5B6 114 aa6.9□□□□□ -1.3
CCDC171-204ENST00000470191 TMEM212A6NML5 194 aa6.9□□□□□ -1.3
CCDC171-204ENST00000470191 OR11H12B2RN74 326 aa6.9□□□□□ -1.3
CCDC171-204ENST00000470191 TFAP2AP05549 437 aa6.9□□□□□ -1.3
CCDC171-204ENST00000470191 T-ENOLP0DO92 83 aa6.9□□□□□ -1.3
CCDC171-204ENST00000470191 CALB2P22676 271 aa6.9□□□□□ -1.3
CCDC171-204ENST00000470191 ZNF93P35789 620 aaPredicted RBP6.9□□□□□ -1.3
CCDC171-204ENST00000470191 EWSR1Q01844 656 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCDC171-204ENST00000470191 TMED1Q13445 227 aa6.9□□□□□ -1.3
CCDC171-204ENST00000470191 RPEL1Q2QD12 228 aa6.9□□□□□ -1.3
CCDC171-204ENST00000470191 AKIRIN2Q53H80 203 aa6.9□□□□□ -1.3
CCDC171-204ENST00000470191 RPL39P5Q59GN2 51 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms