RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 ZNF561Q8N587 486 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 PPP1R35Q8TAP8 253 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 UBALD1Q8TB05 177 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 GIMAP1Q8WWP7 306 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 FXYD6Q9H0Q3 95 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 VSIG4Q9Y279 399 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 IGKV1-6A0A0C4DH72 117 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 CLDN34H7C241 214 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 K7N7A8 449 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 MGST3O14880 152 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 PEX14O75381 377 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 TK1P04183 234 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 PPIAL4GP0DN37 164 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 GLP1RP43220 463 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 NPY4RP50391 375 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 SRSF4Q08170 494 aaKnown RBP11.15□□□□□ -0.62
LINC00173-201ENST00000470091 HERPUD1Q15011 391 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 HMGN3Q15651 99 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 ATPAF1Q5TC12 328 aaPredicted RBP11.15□□□□□ -0.62
LINC00173-201ENST00000470091 WDR25Q64LD2 544 aaPredicted RBP11.15□□□□□ -0.62
LINC00173-201ENST00000470091 TREML4Q6UXN2 200 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 LHFPL1Q86WI0 220 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 FGFRL1Q8N441 504 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 SLC25A21Q9BQT8 299 aaPredicted RBP11.15□□□□□ -0.62
LINC00173-201ENST00000470091 ZNF2Q9BSG1 426 aaPredicted RBP11.15□□□□□ -0.62
LINC00173-201ENST00000470091 PCGF1Q9BSM1 259 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 DCTN5Q9BTE1 182 aa11.15□□□□□ -0.62
LINC00173-201ENST00000470091 MBNL3Q9NUK0 354 aaKnown RBP11.15□□□□□ -0.62
LINC00173-201ENST00000470091 ODAMA1E959 279 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 MEX3AA1L020 520 aaKnown RBP11.14□□□□□ -0.63
LINC00173-201ENST00000470091 FAM181BA6NEQ2 426 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 OR5H14A6NHG9 310 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 C12orf77C9JDV5 145 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 BET1O15155 118 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 DHFRP00374 187 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 VSIG10L2P0DP72 767 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 RAG2P55895 527 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 P2RX3P56373 397 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 DEFA6Q01524 100 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 PAX5Q02548 391 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 AADACL3Q5VUY0 350 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 RUSC1-AS1Q66K80 236 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 ZNF660Q6AZW8 331 aaPredicted RBP11.14□□□□□ -0.63
LINC00173-201ENST00000470091 C9orf139Q6ZV77 190 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 TMED4Q7Z7H5 227 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 OR4A4PQ8NGN8 299 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 OR13A1Q8NGR1 328 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 TERB2Q8NHR7 220 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 MARCH1Q8TCQ1 289 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 MRGPRDQ8TDS7 321 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 DACT3Q96B18 629 aaPredicted RBP11.14□□□□□ -0.63
LINC00173-201ENST00000470091 KIRREL1Q96J84 757 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 SEC22CQ9BRL7 303 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 CABLES2Q9BTV7 478 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 TAF9BQ9HBM6 251 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 MGAT4AQ9UM21 535 aa11.14□□□□□ -0.63
LINC00173-201ENST00000470091 C7orf66A4D0T2 115 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 C22orf46C9J442 243 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 TNFRSF13BO14836 293 aaPredicted RBP11.13□□□□□ -0.63
LINC00173-201ENST00000470091 ADAM20O43506 726 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 PGAM2P15259 253 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 AADACP22760 399 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 NFYAP23511 347 aaPredicted RBP11.13□□□□□ -0.63
LINC00173-201ENST00000470091 FCGR2CP31995 323 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 EDDM3BP56851 147 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 C6orf183Q5T699 404 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 GPR157Q5UAW9 335 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 ZNF841Q6ZN19 808 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 PRR18Q8N4B5 295 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 KIR3DL3Q8N743 410 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 OR6F1Q8NGZ6 308 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 OR1L1Q8NH94 360 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 FAM234AQ9H0X4 552 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 DNTTIP1Q9H147 329 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 KCNIP1Q9NZI2 227 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 OR1A1Q9P1Q5 309 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 CTSZQ9UBR2 303 aa11.13□□□□□ -0.63
LINC00173-201ENST00000470091 WNK1Q9H4A3 2382 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 ENSAO43768 121 aaKnown RBP11.12□□□□□ -0.63
LINC00173-201ENST00000470091 FCN3O75636 299 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 CRYBA1P05813 215 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 NDUFB7P17568 137 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 SSTR5P35346 364 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 MECP2P51608 486 aaKnown RBP11.12□□□□□ -0.63
LINC00173-201ENST00000470091 FXYD4P59646 89 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 HERV-K104P61576 105 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 KCNJ8Q15842 424 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 SLC36A1Q7Z2H8 476 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 OR5D13Q8NGL4 314 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 IL1F10Q8WWZ1 152 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 TOMM40LQ969M1 308 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 MED30Q96HR3 178 aa11.12□□□□□ -0.63
LINC00173-201ENST00000470091 SLC25A10Q9UBX3 287 aaPredicted RBP11.12□□□□□ -0.63
LINC00173-201ENST00000470091 TRBV6-7A0A0A0MS04 114 aa11.11□□□□□ -0.63
LINC00173-201ENST00000470091 FAM172BPA6NC97 362 aa11.11□□□□□ -0.63
LINC00173-201ENST00000470091 PRAF2O60831 178 aa11.11□□□□□ -0.63
LINC00173-201ENST00000470091 TOX4O94842 621 aa11.11□□□□□ -0.63
LINC00173-201ENST00000470091 FSTL3O95633 263 aa11.11□□□□□ -0.63
LINC00173-201ENST00000470091 HBZP02008 142 aa11.11□□□□□ -0.63
LINC00173-201ENST00000470091 IL5P05113 134 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms