RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 FAM90A12PA8MX19 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM90A5PA8MXJ8 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM90A23PA8MXZ1 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 CTXN2P0C2S0 81 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM90A15PP0C7V4 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM90A13PP0C7W8 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM90A14PP0C7W9 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM90A24PP0C7X0 464 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FTH1P19P0C7X4 201 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 IL2RGP31785 369 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 SNRPEP62304 92 aaKnown RBP15.06■□□□□ 0
MCF2L-221ENST00000469415 FAM214BQ7L5A3 538 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 GTF3AQ92664 365 aaKnown RBP15.06■□□□□ 0
MCF2L-221ENST00000469415 ZNF292O60281 2723 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 SSTR5P35346 364 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 FLI1Q01543 452 aaPredicted RBP15.06■□□□□ 0
MCF2L-221ENST00000469415 ID3Q02535 119 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 SOHLH1Q5JUK2 328 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 ABHD14BQ96IU4 210 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 OR2D2Q9H210 308 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 PLK3Q9H4B4 646 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 COL27A1Q8IZC6 1860 aaPredicted RBP15.06■□□□□ 0
MCF2L-221ENST00000469415 HAND1O96004 215 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 ZNF806P0C7X5 589 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 G6PCP35575 357 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 RAB13P51153 203 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 ARL16Q0P5N6 197 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 STX12Q86Y82 276 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 MMP24Q9Y5R2 645 aa15.06■□□□□ 0
MCF2L-221ENST00000469415 H0Y980 276 aa15.05■□□□□ 0
MCF2L-221ENST00000469415 K7N7A8 449 aa15.05■□□□□ 0
MCF2L-221ENST00000469415 SH2D1BO14796 132 aa15.05■□□□□ 0
MCF2L-221ENST00000469415 MLNRO43193 412 aa15.05■□□□□ 0
MCF2L-221ENST00000469415 IGKV1-5P01602 117 aa15.05■□□□□ 0
MCF2L-221ENST00000469415 DRAM1Q8N682 238 aa15.05■□□□□ 0
MCF2L-221ENST00000469415 GMPPAQ96IJ6 420 aaPredicted RBP15.05■□□□□ 0
MCF2L-221ENST00000469415 GP6Q9HCN6 339 aa15.05■□□□□ 0
MCF2L-221ENST00000469415 PARD6AQ9NPB6 346 aa15.05■□□□□ 0
MCF2L-221ENST00000469415 SMCO4Q9NRQ5 59 aa15.05■□□□□ 0
MCF2L-221ENST00000469415 GNG13Q9P2W3 67 aa15.05■□□□□ 0
MCF2L-221ENST00000469415 KPTNQ9Y664 436 aa15.05■□□□□ 0
MCF2L-221ENST00000469415 COLCA2A8K830 154 aa15.05■□□□□ -0
MCF2L-221ENST00000469415 PRSS44E7EML9 344 aa15.05■□□□□ -0
MCF2L-221ENST00000469415 GLIPR1P48060 266 aa15.05■□□□□ -0
MCF2L-221ENST00000469415 ZNF610Q8N9Z0 462 aa15.05■□□□□ -0
MCF2L-221ENST00000469415 ARV1Q9H2C2 271 aa15.05■□□□□ -0
MCF2L-221ENST00000469415 CLDN1O95832 211 aa15.04■□□□□ -0
MCF2L-221ENST00000469415 IGLV2-14P01704 120 aa15.04■□□□□ -0
MCF2L-221ENST00000469415 GABRA6Q16445 453 aa15.04■□□□□ -0
MCF2L-221ENST00000469415 Q6ZR03 302 aa15.04■□□□□ -0
MCF2L-221ENST00000469415 RPRMLQ8N4K4 120 aa15.04■□□□□ -0
MCF2L-221ENST00000469415 OR5D13Q8NGL4 314 aa15.04■□□□□ -0
MCF2L-221ENST00000469415 PSENENQ9NZ42 101 aa15.04■□□□□ -0
MCF2L-221ENST00000469415 CD55P08174 381 aa15.04■□□□□ -0
MCF2L-221ENST00000469415 DEFA4P12838 97 aa15.04■□□□□ -0
MCF2L-221ENST00000469415 RND3P61587 244 aa15.04■□□□□ -0
MCF2L-221ENST00000469415 SSX9Q7RTT3 188 aa15.04■□□□□ -0
MCF2L-221ENST00000469415 ZDHHC11Q9H8X9 412 aa15.04■□□□□ -0
MCF2L-221ENST00000469415 IGHV3OR15-7A0A075B7D8 119 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 OR5H1A6NKK0 313 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 RPL23AP62750 156 aaKnown RBP15.03■□□□□ -0
MCF2L-221ENST00000469415 SCRT1Q9BWW7 348 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 SLC35B3Q9H1N7 401 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 POLDIP2Q9Y2S7 368 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 A0A1W2PPE3 182 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 LRP5LA4QPB2 252 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 KIR2DL2P43627 348 aaPredicted RBP15.03■□□□□ -0
MCF2L-221ENST00000469415 FAM201AQ5SY85 155 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 PBDC1Q9BVG4 233 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 RIMS4Q9H426 269 aaPredicted RBP15.03■□□□□ -0
MCF2L-221ENST00000469415 PITX3O75364 302 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 PTBP3O95758 552 aaKnown RBP15.03■□□□□ -0
MCF2L-221ENST00000469415 RPL30P62888 115 aaKnown RBP15.03■□□□□ -0
MCF2L-221ENST00000469415 C21orf62-AS1Q17RA5 79 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 ZNF585BQ52M93 769 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 RBMS3Q6XE24 437 aaKnown RBP15.03■□□□□ -0
MCF2L-221ENST00000469415 CYB561D1Q8N8Q1 229 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 RNF115Q9Y4L5 304 aa15.03■□□□□ -0
MCF2L-221ENST00000469415 ARFGEF3Q5TH69 2177 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 RBFOX3A6NFN3 312 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 C12orf77C9JDV5 145 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 ST8SIA5O15466 376 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 SYNGR2O43760 224 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 IFNA5P01569 189 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 HEXAP06865 529 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 CECR9P0C854 216 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 ZNF83P51522 516 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 LRP11Q86VZ4 500 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 ZNF295-AS1Q8N0V1 137 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 OR2Z1Q8NG97 314 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 HIST1H2BAQ96A08 127 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 KCNIP1Q9NZI2 227 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 CLN8Q9UBY8 286 aa15.02■□□□□ -0
MCF2L-221ENST00000469415 S100A6P06703 90 aa15.02□□□□□ -0.01
MCF2L-221ENST00000469415 BMP5P22003 454 aa15.02□□□□□ -0.01
MCF2L-221ENST00000469415 SULT1A1P50225 295 aa15.02□□□□□ -0.01
MCF2L-221ENST00000469415 ZNF343Q6P1L6 599 aa15.02□□□□□ -0.01
MCF2L-221ENST00000469415 ZNF497Q6ZNH5 498 aa15.02□□□□□ -0.01
MCF2L-221ENST00000469415 FGFRL1Q8N441 504 aa15.02□□□□□ -0.01
MCF2L-221ENST00000469415 PKIBQ9C010 78 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms