RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 LINC00471Q8N535 108 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 C10orf53Q8N6V4 93 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 PROKR2Q8NFJ6 384 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 OR8B3Q8NGG8 313 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 OR5K2Q8NHB8 316 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 UBA3Q8TBC4 463 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 CCDC110Q8TBZ0 833 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 ZFAND1Q8TCF1 268 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 NMNAT3Q96T66 252 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 VAT1Q99536 393 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 CHID1Q9BWS9 393 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 CDCA4Q9BXL8 241 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 ROPN1BQ9BZX4 212 aaPredicted RBP-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 OR51B5Q9H339 312 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 NT5MQ9NPB1 228 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 SLC35D1Q9NTN3 355 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 OR5AC2Q9NZP5 309 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 CCDC59Q9P031 241 aaKnown RBP-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 UXTQ9UBK9 157 aaPredicted RBP-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 U3KQ87 197 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 C2CD3Q4AC94 2353 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 POLR3AO14802 1390 aaPredicted RBP-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 ABCC9O60706 1549 aa-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 PPRC1Q5VV67 1664 aaKnown RBP-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 ANK3Q12955 4377 aaKnown RBP-1.1□□□□□ -2.59
SHQ1-204ENST00000468347 TTC21AQ8NDW8 1320 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 TRAV7A0A075B6U4 112 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 IGHV3OR15-7A0A075B7D8 119 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 TRAV8-3A0A0A6YYJ7 113 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 TRAV1-1A0A0B4J248 108 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 A0A1B0GXF2 115 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 TRIM64CA6NLI5 447 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 H7C2G1 150 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 TXNDC9O14530 226 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 AIM2O14862 343 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 CRXO43186 299 aaPredicted RBP-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 SNNO75324 88 aaPredicted RBP-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 CST1P01037 141 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 CLPSP04118 112 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 CD14P08571 375 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 SCGB1C2P0DMR2 95 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 CCL4P13236 92 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 CASP2P42575 452 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 RAB25P57735 213 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 OR2B8PP59922 312 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 TPI1P60174 286 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 RAB2AP61019 212 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 SLC35A1P78382 337 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 FGL1Q08830 312 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 LAMTOR4Q0VGL1 99 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 PAFAH1B3Q15102 231 aaKnown RBP-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 DEFB113Q30KQ7 82 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 CDNFQ49AH0 187 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 PRAMEF5Q5TYX0 476 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 PRAMEF6Q5VXH4 476 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 LINC00322Q6ZN03 302 aaPredicted RBP-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 RBM43Q6ZSC3 357 aaKnown RBP-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 ZNF550Q7Z398 422 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 VKORC1L1Q8N0U8 176 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 LRRC75A-AS1Q8N1F1 130 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 KIF2BQ8N4N8 673 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 NKAIN3Q8N8D7 197 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 CLDND2Q8NHS1 167 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 DYNC2LI1Q8TCX1 351 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 SCGB1C1Q8TD33 95 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 ING5Q8WYH8 240 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 TPD52L3Q96J77 140 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 BIRC8Q96P09 236 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 RPRD1AQ96P16 312 aaPredicted RBP-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 ATP6V0BQ99437 205 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 ACBD6Q9BR61 282 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 UTP23Q9BRU9 249 aaKnown RBP-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 TMED9Q9BVK6 235 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 COQ10BQ9H8M1 238 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 ANKRA2Q9H9E1 313 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 SLC2A9Q9NRM0 540 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 SDHAF3Q9NRP4 125 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 ACER3Q9NUN7 267 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 NAT8Q9UHE5 227 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 POMPQ9Y244 141 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 CHD2O14647 1828 aaKnown RBP-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 SPTBN1Q01082 2364 aaKnown RBP-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 F5P12259 2224 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 CHD8Q9HCK8 2581 aa-1.11□□□□□ -2.59
SHQ1-204ENST00000468347 OBSL1O75147 1896 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 TANC1Q9C0D5 1861 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 SPTBN2O15020 2390 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 AKAP9Q99996 3911 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 VPS13BQ7Z7G8 4022 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 TRAV8-4A0A0B4J246 113 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 A6NDN8 102 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 ZNF736B4DX44 427 aaPredicted RBP-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 GOLGA8SH3BPF8 625 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 K7EQM0 130 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 B3GALNT1O75752 331 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 CCNB2O95067 398 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 TSPAN12O95859 305 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 PTHP01270 115 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 P01737 135 aa-1.12□□□□□ -2.59
SHQ1-204ENST00000468347 HBE1P02100 147 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms