RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SVOPQ8N4V2 548 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 OR51D1Q8NGF3 324 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 FAM3DQ96BQ1 224 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 YPEL2Q96QA6 119 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 ABHD14AQ9BUJ0 271 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 RIMS4Q9H426 269 aaPredicted RBP13.53□□□□□ -0.24
SSBP1-207ENST00000468267 CHMP1AQ9HD42 196 aaPredicted RBP13.53□□□□□ -0.24
SSBP1-207ENST00000468267 NDUFB11Q9NX14 153 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 ABRACLQ9P1F3 81 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 HSF4Q9ULV5 492 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 TRBV6-6A0A0A6YYG2 114 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 TRAV1-2A0A0B4J238 106 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 PSMB11A5LHX3 300 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 FOXI3A8MTJ6 420 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-207ENST00000468267 DENRO43583 198 aaKnown RBP13.52□□□□□ -0.25
SSBP1-207ENST00000468267 TMEM50BP56557 158 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 CLDN12P56749 244 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 C2orf76Q3KRA6 126 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 SAMD5Q5TGI4 173 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 CD200R1LQ6Q8B3 271 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 MOB1BQ7L9L4 216 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 ODF3L1Q8IXM7 274 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 Q8N9W7 124 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 CHPT1Q8WUD6 406 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 NOL4LQ96MY1 436 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-207ENST00000468267 AK3Q9UIJ7 227 aa13.52□□□□□ -0.25
SSBP1-207ENST00000468267 SERPINE3A8MV23 424 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 LDLRAD4O15165 306 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 VEGFCP49767 419 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 BEAN1Q3B7T3 259 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 SLC35E3Q7Z769 313 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 ZNF329Q86UD4 541 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 OR8H1Q8NGG4 311 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 SETD6Q8TBK2 473 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 IL1F10Q8WWZ1 152 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 S1PR3Q99500 378 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 ABCG5Q9H222 651 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 Q9H521 79 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 LIN7CQ9NUP9 197 aaKnown RBP13.51□□□□□ -0.25
SSBP1-207ENST00000468267 STEAP1Q9UHE8 339 aa13.51□□□□□ -0.25
SSBP1-207ENST00000468267 TRDV1A0A1B0GX56 115 aa13.5□□□□□ -0.25
SSBP1-207ENST00000468267 LINC01548A6NM66 108 aa13.5□□□□□ -0.25
SSBP1-207ENST00000468267 PDCD5O14737 125 aa13.5□□□□□ -0.25
SSBP1-207ENST00000468267 F2RL1P55085 397 aa13.5□□□□□ -0.25
SSBP1-207ENST00000468267 LSAMPQ13449 338 aa13.5□□□□□ -0.25
SSBP1-207ENST00000468267 KPRPQ5T749 579 aaPredicted RBP13.5□□□□□ -0.25
SSBP1-207ENST00000468267 HES5Q5TA89 166 aa13.5□□□□□ -0.25
SSBP1-207ENST00000468267 UBE2UQ5VVX9 321 aa13.5□□□□□ -0.25
SSBP1-207ENST00000468267 OR2AK2Q8NG84 335 aa13.5□□□□□ -0.25
SSBP1-207ENST00000468267 RBMXL1Q96E39 390 aaKnown RBP13.5□□□□□ -0.25
SSBP1-207ENST00000468267 ARHGAP5-AS1Q96IT6 56 aa13.5□□□□□ -0.25
SSBP1-207ENST00000468267 HDHD3Q9BSH5 251 aaPredicted RBP13.5□□□□□ -0.25
SSBP1-207ENST00000468267 YTHDF1Q9BYJ9 559 aaKnown RBP13.5□□□□□ -0.25
SSBP1-207ENST00000468267 LINC00527Q9UJ94 153 aa13.5□□□□□ -0.25
SSBP1-207ENST00000468267 RAB22AQ9UL26 194 aa13.5□□□□□ -0.25
SSBP1-207ENST00000468267 TMEM272A0A1B0GTI8 110 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 SHISA3A0PJX4 238 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 PF4V1P10720 104 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 GALP22466 123 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 GPR12P47775 334 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 OR3A3P47888 321 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 PLA2G7Q13093 441 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 ZNF833PQ6ZTB9 187 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 FOXRED2Q8IWF2 684 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 SPARTQ8N0X7 666 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 WFDC9Q8NEX5 89 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 OR56B1Q8NGI3 324 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 RASL11BQ9BPW5 248 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 PECRQ9BY49 303 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 MGAT4AQ9UM21 535 aa13.49□□□□□ -0.25
SSBP1-207ENST00000468267 SAA2-SAA4A0A096LPE2 208 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 AP4M1O00189 453 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 SAA2P0DJI9 122 aaPredicted RBP13.48□□□□□ -0.25
SSBP1-207ENST00000468267 MYL9P24844 172 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 OR10A3P58181 314 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 OXLD1Q5BKU9 147 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 KHDC1LQ5JSQ8 128 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 PLAC9Q5JTB6 97 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 STPG2Q8N412 459 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 FAM71E2Q8N5Q1 922 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 NABP2Q9BQ15 211 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 MRPL20Q9BYC9 149 aaKnown RBP13.48□□□□□ -0.25
SSBP1-207ENST00000468267 IFI27L2Q9H2X8 130 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 Q9N2K0 584 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 C12orf4Q9NQ89 552 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 SLC23A1Q9UHI7 598 aa13.48□□□□□ -0.25
SSBP1-207ENST00000468267 IFITM5A6NNB3 132 aa13.47□□□□□ -0.25
SSBP1-207ENST00000468267 ITGB1BP1O14713 200 aa13.47□□□□□ -0.25
SSBP1-207ENST00000468267 RAB3BP20337 219 aa13.47□□□□□ -0.25
SSBP1-207ENST00000468267 SLC35B1P78383 322 aa13.47□□□□□ -0.25
SSBP1-207ENST00000468267 HLA-DRB3P79483 266 aa13.47□□□□□ -0.25
SSBP1-207ENST00000468267 C22orf42Q6IC83 251 aa13.47□□□□□ -0.25
SSBP1-207ENST00000468267 COMMD1Q8N668 190 aa13.47□□□□□ -0.25
SSBP1-207ENST00000468267 KCTD12Q96CX2 325 aaKnown RBP13.47□□□□□ -0.25
SSBP1-207ENST00000468267 CMSS1Q9BQ75 279 aaKnown RBP13.47□□□□□ -0.25
SSBP1-207ENST00000468267 RAB29O14966 203 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 ST8SIA5O15466 376 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 PF4P02776 101 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 CD33P20138 364 aa13.46□□□□□ -0.25
SSBP1-207ENST00000468267 PSMB9P28065 219 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms