RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 KIAA0141Q14154 515 aaPredicted RBP19.09■□□□□ 0.65
PTCH1-210ENST00000468211 ACSM3Q53FZ2 586 aa19.09■□□□□ 0.65
PTCH1-210ENST00000468211 ZNF554Q86TJ5 538 aa19.09■□□□□ 0.65
PTCH1-210ENST00000468211 OR5M8Q8NGP6 311 aa19.09■□□□□ 0.65
PTCH1-210ENST00000468211 MYOZ3Q8TDC0 251 aa19.09■□□□□ 0.65
PTCH1-210ENST00000468211 FAAP24Q9BTP7 215 aa19.09■□□□□ 0.65
PTCH1-210ENST00000468211 SCOCQ9UIL1 159 aa19.09■□□□□ 0.65
PTCH1-210ENST00000468211 YPEL1O60688 119 aa19.08■□□□□ 0.64
PTCH1-210ENST00000468211 MAPK3P27361 379 aaPredicted RBP19.08■□□□□ 0.64
PTCH1-210ENST00000468211 FHL3Q13643 280 aa19.08■□□□□ 0.64
PTCH1-210ENST00000468211 OGFRL1Q5TC84 451 aaPredicted RBP19.08■□□□□ 0.64
PTCH1-210ENST00000468211 ZNF833PQ6ZTB9 187 aa19.08■□□□□ 0.64
PTCH1-210ENST00000468211 C6orf201Q7Z4U5 140 aa19.08■□□□□ 0.64
PTCH1-210ENST00000468211 YPEL2Q96QA6 119 aa19.08■□□□□ 0.64
PTCH1-210ENST00000468211 PRR25Q96S07 402 aa19.08■□□□□ 0.64
PTCH1-210ENST00000468211 CST11Q9H112 138 aa19.08■□□□□ 0.64
PTCH1-210ENST00000468211 GNB4Q9HAV0 340 aa19.08■□□□□ 0.64
PTCH1-210ENST00000468211 GHRLQ9UBU3 117 aa19.08■□□□□ 0.64
PTCH1-210ENST00000468211 SAA2-SAA4A0A096LPE2 208 aa19.07■□□□□ 0.64
PTCH1-210ENST00000468211 ATP6V0E1O15342 81 aa19.07■□□□□ 0.64
PTCH1-210ENST00000468211 SAA2P0DJI9 122 aaPredicted RBP19.07■□□□□ 0.64
PTCH1-210ENST00000468211 HTR2CP28335 458 aa19.07■□□□□ 0.64
PTCH1-210ENST00000468211 GABPB1Q06547 395 aaPredicted RBP19.07■□□□□ 0.64
PTCH1-210ENST00000468211 HMGN3Q15651 99 aa19.07■□□□□ 0.64
PTCH1-210ENST00000468211 C1orf100Q5SVJ3 147 aa19.07■□□□□ 0.64
PTCH1-210ENST00000468211 NICN1Q9BSH3 213 aa19.07■□□□□ 0.64
PTCH1-210ENST00000468211 ANKRD60Q9BZ19 345 aa19.07■□□□□ 0.64
PTCH1-210ENST00000468211 LSM4Q9Y4Z0 139 aaKnown RBP19.07■□□□□ 0.64
PTCH1-210ENST00000468211 IGHV7-81A0A0B4J1V7 117 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 SEC14L6B5MCN3 397 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 RAMP3O60896 148 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 RPS27AP62979 156 aaKnown RBP19.06■□□□□ 0.64
PTCH1-210ENST00000468211 UNC119Q13432 240 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 LY6G6FQ5SQ64 297 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 C9orf66Q5T8R8 295 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 ASPHD1Q5U4P2 390 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 OR11H1Q8NG94 326 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 THRSPQ92748 146 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 GALMQ96C23 342 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 NEDD4LQ96PU5 975 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 TMED9Q9BVK6 235 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 IFI27L2Q9H2X8 130 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 OR51J1Q9H342 316 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 ERGIC3Q9Y282 383 aa19.06■□□□□ 0.64
PTCH1-210ENST00000468211 CASQ2O14958 399 aaPredicted RBP19.05■□□□□ 0.64
PTCH1-210ENST00000468211 NBR2O15453 112 aa19.05■□□□□ 0.64
PTCH1-210ENST00000468211 HLA-DRB1P01911 266 aa19.05■□□□□ 0.64
PTCH1-210ENST00000468211 CDK1P06493 297 aa19.05■□□□□ 0.64
PTCH1-210ENST00000468211 QRFPP83859 136 aa19.05■□□□□ 0.64
PTCH1-210ENST00000468211 SVOPQ8N4V2 548 aa19.05■□□□□ 0.64
PTCH1-210ENST00000468211 ZNF491Q8N8L2 437 aa19.05■□□□□ 0.64
PTCH1-210ENST00000468211 ZNF251Q9BRH9 671 aa19.05■□□□□ 0.64
PTCH1-210ENST00000468211 PARP12Q9H0J9 701 aaKnown RBP19.05■□□□□ 0.64
PTCH1-210ENST00000468211 PARP11Q9NR21 331 aa19.05■□□□□ 0.64
PTCH1-210ENST00000468211 ZMAT5Q9UDW3 170 aaKnown RBP19.05■□□□□ 0.64
PTCH1-210ENST00000468211 LSM2Q9Y333 95 aaKnown RBP19.05■□□□□ 0.64
PTCH1-210ENST00000468211 RYR3Q15413 4870 aa19.04■□□□□ 0.64
PTCH1-210ENST00000468211 A0A0A6YYD4 124 aa19.04■□□□□ 0.64
PTCH1-210ENST00000468211 ST8SIA5O15466 376 aa19.04■□□□□ 0.64
PTCH1-210ENST00000468211 IGLV1-40P01703 118 aa19.04■□□□□ 0.64
PTCH1-210ENST00000468211 UBBP0CG47 229 aa19.04■□□□□ 0.64
PTCH1-210ENST00000468211 OR5H8P0DN80 308 aa19.04■□□□□ 0.64
PTCH1-210ENST00000468211 BLVRBP30043 206 aaPredicted RBP19.04■□□□□ 0.64
PTCH1-210ENST00000468211 ECI1P42126 302 aa19.04■□□□□ 0.64
PTCH1-210ENST00000468211 C5orf64Q2M2E5 130 aa19.04■□□□□ 0.64
PTCH1-210ENST00000468211 RBM48Q5RL73 367 aaKnown RBP19.04■□□□□ 0.64
PTCH1-210ENST00000468211 OR2AK2Q8NG84 335 aa19.04■□□□□ 0.64
PTCH1-210ENST00000468211 IL1F10Q8WWZ1 152 aa19.04■□□□□ 0.64
PTCH1-210ENST00000468211 OR5B12Q96R08 314 aa19.04■□□□□ 0.64
PTCH1-210ENST00000468211 TMEM59Q9BXS4 323 aa19.04■□□□□ 0.64
PTCH1-210ENST00000468211 I3L521 148 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 NAPSAO96009 420 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 GNB1P62873 340 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 NDPQ00604 133 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 DCTN2Q13561 401 aaKnown RBP19.03■□□□□ 0.64
PTCH1-210ENST00000468211 ZNF880Q6PDB4 577 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 MS4A15Q8N5U1 240 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 NPBQ8NG41 125 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 PHYHIPQ92561 330 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 UBE2E2Q96LR5 201 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 WWC2-AS2Q96NR7 200 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 CHCHD6Q9BRQ6 235 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 TM2D1Q9BX74 207 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.03■□□□□ 0.64
PTCH1-210ENST00000468211 FBXO7Q9Y3I1 522 aa19.03■□□□□ 0.64
PTCH1-210ENST00000468211 TRAV41A0A0B4J266 112 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 PTGES3LE9PB15 166 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 RGS11O94810 467 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 NDUFA3O95167 84 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 CD37P11049 281 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 ZNF260Q3ZCT1 412 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 RPL39P5Q59GN2 51 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 RNLSQ5VYX0 342 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 GLT8D1Q68CQ7 371 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 LIN54Q6MZP7 749 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 TMEM65Q6PI78 240 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 FAM131AQ6UXB0 335 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 CEACAM19Q7Z692 300 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 MND1Q9BWT6 205 aa19.02■□□□□ 0.64
PTCH1-210ENST00000468211 LRRC42Q9Y546 428 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms