RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 OR8H1Q8NGG4 311 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 OR10V1Q8NGI7 309 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 CT45A3Q8NHU0 189 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 MRPL30Q8TCC3 161 aaKnown RBP15.11■□□□□ 0.01
COL7A1-207ENST00000467985 OR2S2Q9NQN1 319 aa15.11■□□□□ 0.01
COL7A1-207ENST00000467985 LIN7CQ9NUP9 197 aaKnown RBP15.11■□□□□ 0.01
COL7A1-207ENST00000467985 DNAH3Q8TD57 4116 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 IGHV3-72A0A0B4J1Y9 119 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 SLC22A1O15245 554 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 RGS11O94810 467 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 CD37P11049 281 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 CHATP28329 748 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 HTR2CP28335 458 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 ZNF134P52741 427 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 NKAPLQ5M9Q1 402 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 FAM53AQ6NSI3 398 aaPredicted RBP15.1■□□□□ 0.01
COL7A1-207ENST00000467985 C10orf99Q6UWK7 81 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 ANKRD13BQ86YJ7 626 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 OR6M1Q8NGM8 313 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 CENPOQ9BU64 300 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 JPT1Q9UK76 154 aa15.1■□□□□ 0.01
COL7A1-207ENST00000467985 SLC31A2O15432 143 aa15.09■□□□□ 0.01
COL7A1-207ENST00000467985 LANCL1O43813 399 aa15.09■□□□□ 0.01
COL7A1-207ENST00000467985 BPNT1O95861 308 aa15.09■□□□□ 0.01
COL7A1-207ENST00000467985 SLC6A1P30531 599 aa15.09■□□□□ 0.01
COL7A1-207ENST00000467985 RANBP1P43487 201 aa15.09■□□□□ 0.01
COL7A1-207ENST00000467985 MORN2Q502X0 79 aa15.09■□□□□ 0.01
COL7A1-207ENST00000467985 GALMQ96C23 342 aa15.09■□□□□ 0.01
COL7A1-207ENST00000467985 TM2D1Q9BX74 207 aa15.09■□□□□ 0.01
COL7A1-207ENST00000467985 GON7Q9BXV9 100 aa15.09■□□□□ 0.01
COL7A1-207ENST00000467985 NECAP2Q9NVZ3 263 aa15.09■□□□□ 0.01
COL7A1-207ENST00000467985 TRAV1-2A0A0B4J238 106 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 AP4M1O00189 453 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 LY6G6FQ5SQ64 297 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 OR10K2Q6IF99 312 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 ZNF329Q86UD4 541 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 OR51D1Q8NGF3 324 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 PHF21AQ96BD5 680 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 RCC1LQ96I51 464 aaKnown RBP15.08■□□□□ 0
COL7A1-207ENST00000467985 NOL4LQ96MY1 436 aaPredicted RBP15.08■□□□□ 0
COL7A1-207ENST00000467985 RASL11BQ9BPW5 248 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 SULT4A1Q9BR01 284 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 FAAP24Q9BTP7 215 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 ABHD14AQ9BUJ0 271 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 NAA50Q9GZZ1 169 aaKnown RBP15.08■□□□□ 0
COL7A1-207ENST00000467985 ABCG5Q9H222 651 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 RNF167Q9H6Y7 350 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 PLGRKTQ9HBL7 147 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 ZFP57Q9NU63 452 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 ABRACLQ9P1F3 81 aa15.08■□□□□ 0
COL7A1-207ENST00000467985 TMEM14DPA8MWL7 114 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 YPEL1O60688 119 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 GABARAPO95166 117 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 DUS4LO95620 317 aaKnown RBP15.07■□□□□ 0
COL7A1-207ENST00000467985 RAB3BP20337 219 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 GPR12P47775 334 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 PSMD7P51665 324 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 VBP1P61758 197 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 MXD1Q05195 221 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 UNC119Q13432 240 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 MOB1BQ7L9L4 216 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 STPG2Q8N412 459 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 Q8N9W7 124 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 RAB2BQ8WUD1 216 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 YPEL2Q96QA6 119 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 S1PR3Q99500 378 aa15.07■□□□□ 0
COL7A1-207ENST00000467985 AK6Q9Y3D8 172 aaKnown RBP15.07■□□□□ 0
COL7A1-207ENST00000467985 SLC17A2O00624 439 aa15.06■□□□□ 0
COL7A1-207ENST00000467985 SDC2P34741 201 aa15.06■□□□□ 0
COL7A1-207ENST00000467985 PPP1CCP36873 323 aaKnown RBP15.06■□□□□ 0
COL7A1-207ENST00000467985 SERPINB10P48595 397 aa15.06■□□□□ 0
COL7A1-207ENST00000467985 NCS1P62166 190 aa15.06■□□□□ 0
COL7A1-207ENST00000467985 RPL23AP62750 156 aaKnown RBP15.06■□□□□ 0
COL7A1-207ENST00000467985 QRFPP83859 136 aa15.06■□□□□ 0
COL7A1-207ENST00000467985 OR2W3Q7Z3T1 314 aa15.06■□□□□ 0
COL7A1-207ENST00000467985 C6orf201Q7Z4U5 140 aa15.06■□□□□ 0
COL7A1-207ENST00000467985 TPRA1Q86W33 373 aa15.06■□□□□ 0
COL7A1-207ENST00000467985 OR52L2PQ8NGH6 319 aa15.06■□□□□ 0
COL7A1-207ENST00000467985 URM1Q9BTM9 101 aaKnown RBP15.06■□□□□ 0
COL7A1-207ENST00000467985 RIMS4Q9H426 269 aaPredicted RBP15.06■□□□□ 0
COL7A1-207ENST00000467985 CHMP1AQ9HD42 196 aaPredicted RBP15.06■□□□□ 0
COL7A1-207ENST00000467985 PLSCR3Q9NRY6 295 aa15.06■□□□□ 0
COL7A1-207ENST00000467985 PLEKHJ1Q9NW61 149 aa15.06■□□□□ 0
COL7A1-207ENST00000467985 STEAP1Q9UHE8 339 aa15.06■□□□□ 0
COL7A1-207ENST00000467985 SMIM30A4D0T7 59 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 ZNF736B4DX44 427 aaPredicted RBP15.05■□□□□ -0
COL7A1-207ENST00000467985 NAPSAO96009 420 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 IGLL1P15814 213 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 ARSBP15848 533 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 BLVRBP30043 206 aaPredicted RBP15.05■□□□□ -0
COL7A1-207ENST00000467985 TMBIM6P55061 237 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 LSAMPQ13449 338 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 GNMTQ14749 295 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 HMGN3Q15651 99 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 TEX38Q6PEX7 206 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 FAM71E2Q8N5Q1 922 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 OR2AK2Q8NG84 335 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 LINC00527Q9UJ94 153 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 V9GY05 133 aa15.05■□□□□ -0
COL7A1-207ENST00000467985 PRB2P02812 416 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms