RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 LYZL2Q7Z4W2 148 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 CALHM3Q86XJ0 350 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 OR52E4Q8NGH9 312 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 MFSD8Q8NHS3 518 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 ACY3Q96HD9 319 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 SLC22A4Q9H015 551 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 ABCG5Q9H222 651 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 PARVAQ9NVD7 372 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 POLR3HQ9Y535 204 aaPredicted RBP2.13□□□□□ -2.07
VPS13A-209ENST00000467124 SNX10Q9Y5X0 201 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 PRR14LQ5THK1 2151 aa2.13□□□□□ -2.07
VPS13A-209ENST00000467124 YLPM1P49750 1951 aaKnown RBP2.12□□□□□ -2.07
VPS13A-209ENST00000467124 ARAP3Q8WWN8 1544 aa2.12□□□□□ -2.07
VPS13A-209ENST00000467124 IGSF23A1L1A6 192 aa2.12□□□□□ -2.07
VPS13A-209ENST00000467124 CRYGDP07320 174 aa2.12□□□□□ -2.07
VPS13A-209ENST00000467124 MYL6P60660 151 aa2.12□□□□□ -2.07
VPS13A-209ENST00000467124 OR8G1Q15617 311 aa2.12□□□□□ -2.07
VPS13A-209ENST00000467124 SPIN3Q5JUX0 258 aa2.12□□□□□ -2.07
VPS13A-209ENST00000467124 Q6ZRU5 148 aa2.12□□□□□ -2.07
VPS13A-209ENST00000467124 FAM19A5Q7Z5A7 132 aaPredicted RBP2.12□□□□□ -2.07
VPS13A-209ENST00000467124 OR10D3Q8NH80 312 aa2.12□□□□□ -2.07
VPS13A-209ENST00000467124 ABHD14BQ96IU4 210 aa2.12□□□□□ -2.07
VPS13A-209ENST00000467124 PARD6GQ9BYG4 376 aaPredicted RBP2.12□□□□□ -2.07
VPS13A-209ENST00000467124 MED28Q9H204 178 aa2.12□□□□□ -2.07
VPS13A-209ENST00000467124 RIMS2Q9UQ26 1411 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 SYNGR2O43760 224 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 IGLV6-57P01721 117 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 REG1AP05451 166 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 RPS12P25398 132 aaKnown RBP2.11□□□□□ -2.07
VPS13A-209ENST00000467124 H2BFSP57053 126 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 DAD1P61803 113 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 HERVK_113P63121 156 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 LRRC26Q2I0M4 334 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 TMEM31Q5JXX7 168 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 CST9Q5W186 159 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 LCN8Q6JVE9 175 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 NAA40Q86UY6 237 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 COMMD7Q86VX2 200 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 C3orf22Q8N5N4 141 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 NATD1Q8N6N6 113 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 PACRGLQ8N7B6 248 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 Q8NAQ8 132 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 CCDC112Q8NEF3 446 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 MNS1Q8NEH6 495 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 EEF1AKMT1Q8WVE0 214 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 ASB13Q8WXK3 278 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 TLCD1Q96CP7 247 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 MBOAT7Q96N66 472 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 OR8B2Q96RD0 313 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 DHRS9Q9BPW9 319 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 MAP1LC3AQ9H492 121 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 FGFR1OP2Q9NVK5 253 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 ALG5Q9Y673 324 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 ADGRL1O94910 1474 aa2.11□□□□□ -2.07
VPS13A-209ENST00000467124 IGHV3OR15-7A0A075B7D8 119 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 VPS37CA5D8V6 355 aaPredicted RBP2.1□□□□□ -2.07
VPS13A-209ENST00000467124 SSNA1O43805 119 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 IL6P05231 212 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 OCM2P0CE71 109 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 MIPP30301 263 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 HSPA9P38646 679 aaKnown RBP2.1□□□□□ -2.07
VPS13A-209ENST00000467124 DAPP51397 102 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 MED21Q13503 144 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 FAM229BQ4G0N7 80 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 SAPCD1Q5SSQ6 148 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 BRD3OSQ6XYD6 125 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 NIT1Q86X76 327 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 ZNF664Q8N3J9 261 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 OR5C1Q8NGR4 320 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 TVP23CQ96ET8 276 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 PARVGQ9HBI0 331 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 TAS2R9Q9NYW1 312 aa2.1□□□□□ -2.07
VPS13A-209ENST00000467124 MRPS16Q9Y3D3 137 aaKnown RBP2.1□□□□□ -2.07
VPS13A-209ENST00000467124 CHD2O14647 1828 aaKnown RBP2.1□□□□□ -2.07
VPS13A-209ENST00000467124 A8MWP6 167 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 D6RAR5 112 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 H3BSA7 217 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 CXCR6O00574 342 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 DEDDO75618 318 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 STK16O75716 305 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 SOD1P00441 154 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 OR4A8P0C604 315 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 P0C880 135 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 COL8A2P25067 703 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 OR1E2P47887 323 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 REG1BP48304 166 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 KRTAP10-10P60014 251 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 GNA13Q14344 377 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 JOSD1Q15040 202 aaPredicted RBP2.09□□□□□ -2.07
VPS13A-209ENST00000467124 CST6Q15828 149 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 ZNF567Q8N184 647 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 RPRMLQ8N4K4 120 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 OR10D4PQ8NGN7 298 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 PACRGQ96M98 296 aaPredicted RBP2.09□□□□□ -2.07
VPS13A-209ENST00000467124 TM2D3Q9BRN9 247 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 SPANXB1Q9NS25 103 aaPredicted RBP2.09□□□□□ -2.07
VPS13A-209ENST00000467124 MRPL16Q9NX20 251 aaKnown RBP2.09□□□□□ -2.07
VPS13A-209ENST00000467124 USE1Q9NZ43 259 aa2.09□□□□□ -2.07
VPS13A-209ENST00000467124 SDK2Q58EX2 2172 aa2.09□□□□□ -2.08
VPS13A-209ENST00000467124 ADCY9O60503 1353 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms