RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 OR51I1Q9H343 314 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 C1orf109Q9NX04 203 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 CALYQ9NYX4 217 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 VPREB3Q9UKI3 123 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 SNX12Q9UMY4 172 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 SIGLEC9Q9Y336 463 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 FIS1Q9Y3D6 152 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 USH1CQ9Y6N9 552 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 DNAH3Q8TD57 4116 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 WNK1Q9H4A3 2382 aa1.92□□□□□ -2.1
XRN1-206ENST00000467077 IGLV4-69A0A075B6H9 119 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 IGHV1-69DA0A0B4J2H0 117 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 FAM240BA0A1B0GVZ2 78 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 A0A1W2PPE3 182 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 A0A1W2PRD5 423 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 A0A1W2PRF3 423 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 A0A1W2PRM7 423 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 C5orf49A4QMS7 147 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 C12orf71A8MTZ7 269 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 TMEM114B3SHH9 223 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 ZNF879B4DU55 563 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 RNASEK-C17orf49H0YIS7 233 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 H3BUX3 64 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 AIM2O14862 343 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 ENSAO43768 121 aaKnown RBP1.91□□□□□ -2.1
XRN1-206ENST00000467077 ENTPD5O75356 428 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 FARS2O95363 451 aaKnown RBP1.91□□□□□ -2.1
XRN1-206ENST00000467077 SNAP29O95721 258 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 PAHP00439 452 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 SERPINA3P01011 423 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 IGHV1-69P01742 117 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 FBP1P09467 338 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 LINC00032P0C843 101 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 GKN3PP0CG01 181 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 CD28P10747 220 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 NCF2P19878 526 aaPredicted RBP1.91□□□□□ -2.1
XRN1-206ENST00000467077 STOMP27105 288 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 PHBP35232 272 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 APLNRP35414 380 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 CFHR2P36980 270 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 MPV17P39210 176 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 PLTPP55058 493 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 PPP1CBP62140 327 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 RPL23AP62750 156 aaKnown RBP1.91□□□□□ -2.1
XRN1-206ENST00000467077 ERVK-25P63136 954 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 HBA1P69905 142 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 REG3AQ06141 175 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 MRPL28Q13084 256 aaKnown RBP1.91□□□□□ -2.1
XRN1-206ENST00000467077 GNA13Q14344 377 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 PSG5Q15238 335 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 XKR7Q5GH72 579 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 C6orf226Q5I0X4 101 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 TMEM255AQ5JRV8 349 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 MRPL2Q5T653 305 aaKnown RBP1.91□□□□□ -2.1
XRN1-206ENST00000467077 LCN12Q6JVE5 192 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 TNFAIP8L2Q6P589 184 aaPredicted RBP1.91□□□□□ -2.1
XRN1-206ENST00000467077 LYPD2Q6UXB3 125 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 ZNF621Q6ZSS3 439 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 ZCCHC23Q6ZST2 131 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 SLC16A14Q7RTX9 510 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 NDUFA11Q86Y39 141 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 TGIF2LXQ8IUE1 241 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 SLC22A9Q8IVM8 553 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 C20orf196Q8IYI0 205 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 ZNF101Q8IZC7 436 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 SLC35F6Q8N357 371 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 LRRC18Q8N456 261 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 NATD1Q8N6N6 113 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 SPERTQ8NA61 448 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 OR4K5Q8NGD3 323 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 OR10G9Q8NGN4 311 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 OR4C13Q8NGP0 309 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 OR1L6Q8NGR2 347 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 OR13C2Q8NGS9 318 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 OR6X1Q8NH79 312 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 MFSD8Q8NHS3 518 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 SLC25A40Q8TBP6 338 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 SFXN5Q8TD22 340 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 KLF14Q8TD94 323 aaPredicted RBP1.91□□□□□ -2.1
XRN1-206ENST00000467077 L3HYPDHQ96EM0 354 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 FAM210BQ96KR6 192 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 OR8B4Q96RC9 309 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 OR2J1Q9GZK6 312 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 C1orf198Q9H425 327 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 RANBP3Q9H6Z4 567 aaPredicted RBP1.91□□□□□ -2.1
XRN1-206ENST00000467077 CCNB1IP1Q9NPC3 277 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 SLC25A37Q9NYZ2 338 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 TMEM216Q9P0N5 145 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 XCL2Q9UBD3 114 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 CLN8Q9UBY8 286 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 MARCOQ9UEW3 520 aaPredicted RBP1.91□□□□□ -2.1
XRN1-206ENST00000467077 CAB39Q9Y376 341 aaPredicted RBP1.91□□□□□ -2.1
XRN1-206ENST00000467077 TMED5Q9Y3A6 229 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 PEX16Q9Y5Y5 336 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 TENM2Q9NT68 2774 aa1.91□□□□□ -2.1
XRN1-206ENST00000467077 IGLV4-60A0A075B6I1 120 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 A0A096LPI6 279 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 IGHV3-64DA0A0J9YX35 117 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 LOC102725191A0A1B0GVB3 256 aa1.9□□□□□ -2.11
XRN1-206ENST00000467077 EXOC1LA0A1B0GW35 172 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms