RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 CNBD2Q96M20 576 aa13.14□□□□□ -0.31
SDHB-203ENST00000466613 YPEL2Q96QA6 119 aa13.14□□□□□ -0.31
SDHB-203ENST00000466613 S1PR3Q99500 378 aa13.14□□□□□ -0.31
SDHB-203ENST00000466613 URM1Q9BTM9 101 aaKnown RBP13.14□□□□□ -0.31
SDHB-203ENST00000466613 LPAR5Q9H1C0 372 aa13.14□□□□□ -0.31
SDHB-203ENST00000466613 ABRACLQ9P1F3 81 aa13.14□□□□□ -0.31
SDHB-203ENST00000466613 BLOC1S6Q9UL45 172 aa13.14□□□□□ -0.31
SDHB-203ENST00000466613 LINC01548A6NM66 108 aa13.13□□□□□ -0.31
SDHB-203ENST00000466613 AP4M1O00189 453 aa13.13□□□□□ -0.31
SDHB-203ENST00000466613 PRB2P02812 416 aaPredicted RBP13.13□□□□□ -0.31
SDHB-203ENST00000466613 CALRP27797 417 aaKnown RBP13.13□□□□□ -0.31
SDHB-203ENST00000466613 RPL23AP62750 156 aaKnown RBP13.13□□□□□ -0.31
SDHB-203ENST00000466613 FABP5Q01469 135 aa13.13□□□□□ -0.31
SDHB-203ENST00000466613 P2RY14Q15391 338 aa13.13□□□□□ -0.31
SDHB-203ENST00000466613 TBCEQ15813 527 aaPredicted RBP13.13□□□□□ -0.31
SDHB-203ENST00000466613 ZNF880Q6PDB4 577 aa13.13□□□□□ -0.31
SDHB-203ENST00000466613 COMMD1Q8N668 190 aa13.13□□□□□ -0.31
SDHB-203ENST00000466613 RASL11BQ9BPW5 248 aa13.13□□□□□ -0.31
SDHB-203ENST00000466613 CHMP1AQ9HD42 196 aaPredicted RBP13.13□□□□□ -0.31
SDHB-203ENST00000466613 NECAP2Q9NVZ3 263 aa13.13□□□□□ -0.31
SDHB-203ENST00000466613 PLEKHJ1Q9NW61 149 aa13.13□□□□□ -0.31
SDHB-203ENST00000466613 IGLL1P15814 213 aa13.12□□□□□ -0.31
SDHB-203ENST00000466613 RAB11BQ15907 218 aa13.12□□□□□ -0.31
SDHB-203ENST00000466613 Q6ZPA2 131 aa13.12□□□□□ -0.31
SDHB-203ENST00000466613 MOB1BQ7L9L4 216 aa13.12□□□□□ -0.31
SDHB-203ENST00000466613 ZNF367Q7RTV3 350 aa13.12□□□□□ -0.31
SDHB-203ENST00000466613 FAM89BQ8N5H3 189 aa13.12□□□□□ -0.31
SDHB-203ENST00000466613 FAM71E2Q8N5Q1 922 aa13.12□□□□□ -0.31
SDHB-203ENST00000466613 OR2AK2Q8NG84 335 aa13.12□□□□□ -0.31
SDHB-203ENST00000466613 RBMXL1Q96E39 390 aaKnown RBP13.12□□□□□ -0.31
SDHB-203ENST00000466613 RIMS4Q9H426 269 aaPredicted RBP13.12□□□□□ -0.31
SDHB-203ENST00000466613 ACOT13Q9NPJ3 140 aa13.12□□□□□ -0.31
SDHB-203ENST00000466613 RAB26Q9ULW5 256 aa13.12□□□□□ -0.31
SDHB-203ENST00000466613 TRBV6-6A0A0A6YYG2 114 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 FOXI3A8MTJ6 420 aaPredicted RBP13.11□□□□□ -0.31
SDHB-203ENST00000466613 SOCS1O15524 211 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 F2RL1P55085 397 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 ZNF833PQ6ZTB9 187 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 OR51D1Q8NGF3 324 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 SETD6Q8TBK2 473 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 IL1F10Q8WWZ1 152 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 GON7Q9BXV9 100 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 IFI27L2Q9H2X8 130 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 ZFP57Q9NU63 452 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 STEAP1Q9UHE8 339 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 AK3Q9UIJ7 227 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 HSF4Q9ULV5 492 aa13.11□□□□□ -0.31
SDHB-203ENST00000466613 SAA2-SAA4A0A096LPE2 208 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 SAA2P0DJI9 122 aaPredicted RBP13.1□□□□□ -0.31
SDHB-203ENST00000466613 SLC6A1P30531 599 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 SOX6P35712 828 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 RANBP1P43487 201 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 OR3A3P47888 321 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 PSMD7P51665 324 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 CLDN12P56749 244 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 FOXB2Q5VYV0 432 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 FAM71F2Q6NXP2 309 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 TEX38Q6PEX7 206 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 ETV3LQ6ZN32 361 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 LINC00482Q8N8I6 264 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 RCC1LQ96I51 464 aaKnown RBP13.1□□□□□ -0.31
SDHB-203ENST00000466613 NABP2Q9BQ15 211 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 HSPB9Q9BQS6 159 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 MRPL20Q9BYC9 149 aaKnown RBP13.1□□□□□ -0.31
SDHB-203ENST00000466613 V9GY05 133 aa13.1□□□□□ -0.31
SDHB-203ENST00000466613 RRP9O43818 475 aaKnown RBP13.09□□□□□ -0.31
SDHB-203ENST00000466613 DUS4LO95620 317 aaKnown RBP13.09□□□□□ -0.31
SDHB-203ENST00000466613 THBS3P49746 956 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 VEGFCP49767 419 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 TMEM50BP56557 158 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 HLA-DRB3P79483 266 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 MMDQ15546 238 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 SSX1Q16384 188 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 PNLIPRP3Q17RR3 467 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 C18orf65Q6ZTR6 163 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 C8orf86Q6ZUL3 223 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 KLHL30-AS1Q8NEE0 82 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 FAM3DQ96BQ1 224 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 HDHD3Q9BSH5 251 aaPredicted RBP13.09□□□□□ -0.31
SDHB-203ENST00000466613 AURKAIP1Q9NWT8 199 aaPredicted RBP13.09□□□□□ -0.31
SDHB-203ENST00000466613 PIPOXQ9P0Z9 390 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 MGAT4AQ9UM21 535 aa13.09□□□□□ -0.31
SDHB-203ENST00000466613 NUDT19A8MXV4 375 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 LDLRAD4O15165 306 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 ST8SIA5O15466 376 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 ATP6V1G2O95670 118 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 GABARAPL2P60520 117 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 ACTBP60709 375 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 C2orf76Q3KRA6 126 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 HES5Q5TA89 166 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 MRPL41Q8IXM3 137 aaKnown RBP13.08□□□□□ -0.32
SDHB-203ENST00000466613 OR56B1Q8NGI3 324 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 MRAPQ8TCY5 172 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 ARHGAP5-AS1Q96IT6 56 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 PECRQ9BY49 303 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 C12orf4Q9NQ89 552 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 NDUFB11Q9NX14 153 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 SLC23A1Q9UHI7 598 aa13.08□□□□□ -0.32
SDHB-203ENST00000466613 ZNF107Q9UII5 783 aaPredicted RBP13.08□□□□□ -0.32
SDHB-203ENST00000466613 ZNF580Q9UK33 172 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms