RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 NKX2-5P52952 324 aaPredicted RBP2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 CLDN12P56749 244 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 MAGOHP61326 146 aaKnown RBP2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 DYNLL1P63167 89 aaKnown RBP2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 MGAT3Q09327 533 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 LRRC26Q2I0M4 334 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 CENPWQ5EE01 88 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 SDHAF4Q5VUM1 108 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 PPP1R2P3Q6NXS1 205 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 OR5L1Q8NGL2 311 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 CD200R1Q8TD46 325 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 DRC3Q9H069 523 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 C11orf49Q9H6J7 331 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 METTL17Q9H7H0 456 aaPredicted RBP2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 EMC3Q9P0I2 261 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 CARHSP1Q9Y2V2 147 aaKnown RBP2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 A0A1W2PNM2 257 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 F5H768 121 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 SULT1B1O43704 296 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 DEXIO95424 95 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 PET100P0DJ07 73 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 C8orf88P0DMB2 117 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 HIST1H1CP16403 213 aaKnown RBP2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 CFL1P23528 166 aaKnown RBP2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 GZMMP51124 257 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 GABARAPL2P60520 117 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 HES3Q5TGS1 186 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 SCGB1D4Q6XE38 83 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 BLIDQ8IZY5 108 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 TMEM251Q8N6I4 163 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 STOML3Q8TAV4 291 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 PRAP1Q96NZ9 151 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 GPR22Q99680 433 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 SLC19A3Q9BZV2 496 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 METTL9Q9H1A3 318 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 HRASLSQ9HDD0 168 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 ZFYVE9O95405 1425 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 ADGRL3Q9HAR2 1447 aa2.06□□□□□ -2.08
CDC42BPA-211ENST00000466538 IGKV1-12A0A0C4DH73 117 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 SLC25A20O43772 301 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 PSMG1O95456 288 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 NSA2O95478 260 aaKnown RBP2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 IFNA5P01569 189 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 IGKV1D-12P01611 117 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 IFNA6P05013 189 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 KRT7P08729 469 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 CRABP1P29762 137 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 AGTR1P30556 359 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 GABRA3P34903 492 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 PSMD7P51665 324 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 AKR1C2P52895 323 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 LSM6P62312 80 aaKnown RBP2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 MLLT11Q13015 90 aaPredicted RBP2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 OR8G1Q15617 311 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 MAPK14Q16539 360 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 C4orf26Q17RF5 130 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 TBC1D28Q2M2D7 210 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 SPIN4Q56A73 249 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 RIBC1Q8N443 379 aaPredicted RBP2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 NATD1Q8N6N6 113 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 OR51H1Q8NH63 302 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 ZNRF2Q8NHG8 242 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 PTH2Q96A98 100 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 OR8B2Q96RD0 313 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 EBNA1BP2Q99848 306 aaKnown RBP2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 DCUN1D5Q9BTE7 237 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 GTSF1LQ9H1H1 148 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 TAS2R9Q9NYW1 312 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 USE1Q9NZ43 259 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 VPREB3Q9UKI3 123 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 FIS1Q9Y3D6 152 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 RIMS2Q9UQ26 1411 aa2.05□□□□□ -2.08
CDC42BPA-211ENST00000466538 A0A1W2PQL4 384 aaPredicted RBP2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 A8MWP6 167 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 C21orf140B9A014 251 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 BIRC5O15392 142 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 HPGDSO60760 199 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 ZNF189O75820 626 aaPredicted RBP2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 OR12D1P0DN82 309 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 ZNF22P17026 224 aaPredicted RBP2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 CAPZBP47756 277 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 TSPAN31Q12999 210 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 PDK2Q15119 407 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 ZCCHC6Q5VYS8 1495 aaKnown RBP2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 EBLN2Q6P2I7 272 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 FAM19A5Q7Z5A7 132 aaPredicted RBP2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 TTC21AQ8NDW8 1320 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 RBP7Q96R05 134 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 BABAM2Q9NXR7 383 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 GLS2Q9UI32 602 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 LINC00527Q9UJ94 153 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 C3orf18Q9UK00 162 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 WASHC3Q9Y3C0 194 aa2.04□□□□□ -2.08
CDC42BPA-211ENST00000466538 HIVEP2P31629 2446 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 SNAPC4Q5SXM2 1469 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 TINCRA0A1B0GVN0 87 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 DAPL1A0PJW8 107 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms