RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 TVP23CQ96ET8 276 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 NIPSNAP3BQ9BS92 247 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 CACNA1DQ01668 2161 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 TRAV1-1A0A0B4J248 108 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 LOC102723971A0A1B0GUV8 181 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 IFNA17P01571 189 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 IDH3GP51553 393 aaPredicted RBP16.35■□□□□ 0.21
LIMS2-212ENST00000466410 DRAM1Q8N682 238 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 URGCP-MRPS24S4R325 110 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 TTC28Q96AY4 2481 aa16.35■□□□□ 0.21
LIMS2-212ENST00000466410 A0A087WWC5 75 aa16.34■□□□□ 0.21
LIMS2-212ENST00000466410 NXPH2O95156 264 aa16.34■□□□□ 0.21
LIMS2-212ENST00000466410 HOXB1P14653 301 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-212ENST00000466410 ZNF726P1Q15940 193 aa16.34■□□□□ 0.21
LIMS2-212ENST00000466410 Q8WTZ3 238 aa16.34■□□□□ 0.21
LIMS2-212ENST00000466410 LIN7CQ9NUP9 197 aaKnown RBP16.34■□□□□ 0.21
LIMS2-212ENST00000466410 OR14J1Q9UGF5 321 aa16.34■□□□□ 0.21
LIMS2-212ENST00000466410 POLDIP2Q9Y2S7 368 aa16.34■□□□□ 0.21
LIMS2-212ENST00000466410 TRGV5A0A0B4J1U4 118 aa16.34■□□□□ 0.21
LIMS2-212ENST00000466410 PGA5P0DJD9 388 aa16.34■□□□□ 0.21
LIMS2-212ENST00000466410 CEBPDP49716 269 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-212ENST00000466410 ELOBQ15370 118 aa16.34■□□□□ 0.21
LIMS2-212ENST00000466410 LCN15Q6UWW0 184 aa16.34■□□□□ 0.21
LIMS2-212ENST00000466410 Q8IYB0 196 aa16.34■□□□□ 0.21
LIMS2-212ENST00000466410 ZNF665Q9H7R5 613 aa16.34■□□□□ 0.21
LIMS2-212ENST00000466410 MBNL3Q9NUK0 354 aaKnown RBP16.34■□□□□ 0.21
LIMS2-212ENST00000466410 ZFP92A6NM28 416 aa16.33■□□□□ 0.21
LIMS2-212ENST00000466410 CXCL1P09341 107 aa16.33■□□□□ 0.21
LIMS2-212ENST00000466410 CD46P15529 392 aa16.33■□□□□ 0.21
LIMS2-212ENST00000466410 ERVFRD-1P60508 538 aa16.33■□□□□ 0.21
LIMS2-212ENST00000466410 DHRS13Q6UX07 377 aa16.33■□□□□ 0.21
LIMS2-212ENST00000466410 SSX7Q7RTT5 188 aa16.33■□□□□ 0.21
LIMS2-212ENST00000466410 CHD3Q12873 2000 aaKnown RBP16.33■□□□□ 0.21
LIMS2-212ENST00000466410 USF3Q68DE3 2245 aa16.33■□□□□ 0.21
LIMS2-212ENST00000466410 CLN5O75503 358 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 TNFSF15O95150 251 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 GRPP07492 148 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 FGF8P55075 233 aaPredicted RBP16.33■□□□□ 0.2
LIMS2-212ENST00000466410 ZNF146Q15072 292 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 NCMAPQ5T1S8 102 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 TMEM9BQ9NQ34 198 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 NIT2Q9NQR4 276 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 SH2D1BO14796 132 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 SPANXN5Q5MJ07 72 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 ZNF787Q6DD87 383 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 FAM53AQ6NSI3 398 aaPredicted RBP16.33■□□□□ 0.2
LIMS2-212ENST00000466410 SLC25A40Q8TBP6 338 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 FER1L6-AS2Q96M78 137 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 CDH20Q9HBT6 801 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 WIPI2Q9Y4P8 454 aa16.33■□□□□ 0.2
LIMS2-212ENST00000466410 PRR14LQ5THK1 2151 aa16.32■□□□□ 0.2
LIMS2-212ENST00000466410 RAB11AP62491 216 aa16.32■□□□□ 0.2
LIMS2-212ENST00000466410 HOXA4Q00056 320 aaPredicted RBP16.32■□□□□ 0.2
LIMS2-212ENST00000466410 SLC35E3Q7Z769 313 aa16.32■□□□□ 0.2
LIMS2-212ENST00000466410 FGFRL1Q8N441 504 aa16.32■□□□□ 0.2
LIMS2-212ENST00000466410 ZNF251Q9BRH9 671 aa16.32■□□□□ 0.2
LIMS2-212ENST00000466410 CDX4O14627 284 aaPredicted RBP16.32■□□□□ 0.2
LIMS2-212ENST00000466410 KIAA0141Q14154 515 aaPredicted RBP16.32■□□□□ 0.2
LIMS2-212ENST00000466410 LRRC75BQ2VPJ9 315 aa16.32■□□□□ 0.2
LIMS2-212ENST00000466410 FAM90A2PQ658T7 463 aa16.32■□□□□ 0.2
LIMS2-212ENST00000466410 LILRB2Q8N423 598 aa16.32■□□□□ 0.2
LIMS2-212ENST00000466410 RCC1LQ96I51 464 aaKnown RBP16.32■□□□□ 0.2
LIMS2-212ENST00000466410 RNF150Q9ULK6 438 aa16.32■□□□□ 0.2
LIMS2-212ENST00000466410 PSPNO60542 156 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 LYZL6O75951 148 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 IGHV1-2P23083 117 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 CD200P41217 278 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 HBG1P69891 147 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 HBG2P69892 147 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 PSG7Q13046 419 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 TMPRSS7Q7RTY8 843 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 GCNT2Q8N0V5 402 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 TCTEX1D2Q8WW35 142 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 OR4C12Q96R67 309 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 TCEAL7Q9BRU2 100 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 TGIF2-C20orf24A0A0A6YYL0 155 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 PPIHO43447 177 aaKnown RBP16.31■□□□□ 0.2
LIMS2-212ENST00000466410 BCL2P10415 239 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 EIF2S3P41091 472 aaKnown RBP16.31■□□□□ 0.2
LIMS2-212ENST00000466410 MRPL49Q13405 166 aaKnown RBP16.31■□□□□ 0.2
LIMS2-212ENST00000466410 ZNF766Q5HY98 468 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 OR1L1Q8NH94 360 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 MBD3L1Q8WWY6 194 aa16.31■□□□□ 0.2
LIMS2-212ENST00000466410 PSMG3Q9BT73 122 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-212ENST00000466410 HAND1O96004 215 aa16.3■□□□□ 0.2
LIMS2-212ENST00000466410 GLIPR1P48060 266 aa16.3■□□□□ 0.2
LIMS2-212ENST00000466410 UBE2NP61088 152 aaKnown RBP16.3■□□□□ 0.2
LIMS2-212ENST00000466410 PMP22Q01453 160 aa16.3■□□□□ 0.2
LIMS2-212ENST00000466410 OR10G4Q8NGN3 311 aa16.3■□□□□ 0.2
LIMS2-212ENST00000466410 GSN-AS1Q9NRJ2 163 aa16.3■□□□□ 0.2
LIMS2-212ENST00000466410 CISD1Q9NZ45 108 aaKnown RBP16.3■□□□□ 0.2
LIMS2-212ENST00000466410 J3QW42 95 aa16.3■□□□□ 0.2
LIMS2-212ENST00000466410 RAMP3O60896 148 aa16.3■□□□□ 0.2
LIMS2-212ENST00000466410 PLA2G5P39877 138 aa16.3■□□□□ 0.2
LIMS2-212ENST00000466410 ARG2P78540 354 aa16.3■□□□□ 0.2
LIMS2-212ENST00000466410 FAM180AQ6UWF9 173 aa16.3■□□□□ 0.2
LIMS2-212ENST00000466410 WDR61Q9GZS3 305 aaKnown RBP16.3■□□□□ 0.2
LIMS2-212ENST00000466410 LOC400499M0QZD8 3231 aa16.29■□□□□ 0.2
LIMS2-212ENST00000466410 DOCK11Q5JSL3 2073 aa16.29■□□□□ 0.2
LIMS2-212ENST00000466410 LINC00587B1AMM8 73 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms