RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 DIRAS3O95661 229 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 KIR2DS4P43632 304 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 ARHGDIBP52566 201 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 HABP2Q14520 560 aaPredicted RBP16.32■□□□□ 0.2
SKA3-205ENST00000465471 KIR2DS1Q14954 304 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 SPCS2Q15005 226 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 OR8H3Q8N146 312 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 SAMD12Q8N8I0 201 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 OR4A4PQ8NGN8 299 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 ACOT12Q8WYK0 555 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 CMTM3Q96MX0 182 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 CABLES2Q9BTV7 478 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 ABHD14AQ9BUJ0 271 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 TOLLIPQ9H0E2 274 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 ZNF230Q9UIE0 474 aaPredicted RBP16.32■□□□□ 0.2
SKA3-205ENST00000465471 PITPNC1Q9UKF7 332 aa16.32■□□□□ 0.2
SKA3-205ENST00000465471 TRAV18A0A075B6X5 111 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 ITGB1BP1O14713 200 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 FABP7O15540 132 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 IL3RAP26951 378 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 BRS3P32247 399 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 MNDAP41218 407 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 PITPNAQ00169 270 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 FOXL1Q12952 345 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 FBLN7Q53RD9 439 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 AWAT1Q58HT5 328 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 DHRS7BQ6IAN0 325 aaPredicted RBP16.31■□□□□ 0.2
SKA3-205ENST00000465471 ODF3L1Q8IXM7 274 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 NUDCD2Q8WVJ2 157 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 MAFIPQ8WZ33 124 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 PHF21AQ96BD5 680 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 IFI27L2Q9H2X8 130 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 RAB18Q9NP72 206 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 DIABLOQ9NR28 239 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 OR1A1Q9P1Q5 309 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 MMP24Q9Y5R2 645 aa16.31■□□□□ 0.2
SKA3-205ENST00000465471 IGKV1D-8A0A087WSZ0 117 aa16.3■□□□□ 0.2
SKA3-205ENST00000465471 TIMM23O14925 209 aa16.3■□□□□ 0.2
SKA3-205ENST00000465471 XRCC3O43542 346 aa16.3■□□□□ 0.2
SKA3-205ENST00000465471 CRYBA1P05813 215 aa16.3■□□□□ 0.2
SKA3-205ENST00000465471 ZBTB25P24278 435 aa16.3■□□□□ 0.2
SKA3-205ENST00000465471 TALDO1P37837 337 aa16.3■□□□□ 0.2
SKA3-205ENST00000465471 RAG2P55895 527 aa16.3■□□□□ 0.2
SKA3-205ENST00000465471 Q6ZSV7 163 aa16.3■□□□□ 0.2
SKA3-205ENST00000465471 RTN4IP1Q8WWV3 396 aaPredicted RBP16.3■□□□□ 0.2
SKA3-205ENST00000465471 S100A16Q96FQ6 103 aaKnown RBP16.3■□□□□ 0.2
SKA3-205ENST00000465471 PARP12Q9H0J9 701 aaKnown RBP16.3■□□□□ 0.2
SKA3-205ENST00000465471 AUNIPQ9H7T9 357 aa16.3■□□□□ 0.2
SKA3-205ENST00000465471 SLC23A1Q9UHI7 598 aa16.3■□□□□ 0.2
SKA3-205ENST00000465471 IGHV1-3A0A0C4DH29 117 aa16.29■□□□□ 0.2
SKA3-205ENST00000465471 TSPAN9O75954 239 aa16.29■□□□□ 0.2
SKA3-205ENST00000465471 GAPDHP04406 335 aaKnown RBP16.29■□□□□ 0.2
SKA3-205ENST00000465471 GSTT2P0CG29 244 aa16.29■□□□□ 0.2
SKA3-205ENST00000465471 GSTT2BP0CG30 244 aa16.29■□□□□ 0.2
SKA3-205ENST00000465471 ZNF182P17025 639 aaPredicted RBP16.29■□□□□ 0.2
SKA3-205ENST00000465471 GNG2P59768 71 aa16.29■□□□□ 0.2
SKA3-205ENST00000465471 THNSL2Q86YJ6 484 aa16.29■□□□□ 0.2
SKA3-205ENST00000465471 IZUMO1Q8IYV9 350 aa16.29■□□□□ 0.2
SKA3-205ENST00000465471 OR2AK2Q8NG84 335 aa16.29■□□□□ 0.2
SKA3-205ENST00000465471 AGMATQ9BSE5 352 aa16.29■□□□□ 0.2
SKA3-205ENST00000465471 C16orf95Q9H693 158 aa16.29■□□□□ 0.2
SKA3-205ENST00000465471 COMMD3Q9UBI1 195 aa16.29■□□□□ 0.2
SKA3-205ENST00000465471 TRBV6-7A0A0A0MS04 114 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 TXNL1O43396 289 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 LANCL1O43813 399 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 APOA1P02647 267 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 EIF4EP06730 217 aaKnown RBP16.28■□□□□ 0.2
SKA3-205ENST00000465471 CD24P25063 80 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 IGSF11Q5DX21 431 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 TMEM219Q86XT9 240 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 LYG1Q8N1E2 194 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 DRAM1Q8N682 238 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 OR4F5Q8NH21 305 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 OR56B4Q8NH76 319 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 AP3S1Q92572 193 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 ISOC1Q96CN7 298 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 RANBP3Q9H6Z4 567 aaPredicted RBP16.28■□□□□ 0.2
SKA3-205ENST00000465471 CEPT1Q9Y6K0 416 aa16.28■□□□□ 0.2
SKA3-205ENST00000465471 H3BMQ9 156 aa16.27■□□□□ 0.2
SKA3-205ENST00000465471 MDKP21741 143 aaPredicted RBP16.27■□□□□ 0.2
SKA3-205ENST00000465471 CEACAM6P40199 344 aa16.27■□□□□ 0.2
SKA3-205ENST00000465471 REG1BP48304 166 aa16.27■□□□□ 0.2
SKA3-205ENST00000465471 ZNF833PQ6ZTB9 187 aa16.27■□□□□ 0.2
SKA3-205ENST00000465471 C16orf82Q7Z2V1 217 aa16.27■□□□□ 0.2
SKA3-205ENST00000465471 DYNC2LI1Q8TCX1 351 aa16.27■□□□□ 0.2
SKA3-205ENST00000465471 EDARADDQ8WWZ3 215 aa16.27■□□□□ 0.2
SKA3-205ENST00000465471 C11orf54Q9H0W9 315 aaPredicted RBP16.27■□□□□ 0.2
SKA3-205ENST00000465471 SAA2-SAA4A0A096LPE2 208 aa16.26■□□□□ 0.19
SKA3-205ENST00000465471 A0A1B0GUS0 222 aa16.26■□□□□ 0.19
SKA3-205ENST00000465471 ST8SIA5O15466 376 aa16.26■□□□□ 0.19
SKA3-205ENST00000465471 HSPA12AO43301 675 aa16.26■□□□□ 0.19
SKA3-205ENST00000465471 OR2F2O95006 317 aa16.26■□□□□ 0.19
SKA3-205ENST00000465471 SNRNP70P08621 437 aaKnown RBP16.26■□□□□ 0.19
SKA3-205ENST00000465471 SAA2P0DJI9 122 aaPredicted RBP16.26■□□□□ 0.19
SKA3-205ENST00000465471 TAS2R20P59543 309 aa16.26■□□□□ 0.19
SKA3-205ENST00000465471 EBI3Q14213 229 aa16.26■□□□□ 0.19
SKA3-205ENST00000465471 TMEM69Q5SWH9 247 aa16.26■□□□□ 0.19
SKA3-205ENST00000465471 FAM71F2Q6NXP2 309 aa16.26■□□□□ 0.19
SKA3-205ENST00000465471 TGIF2LXQ8IUE1 241 aa16.26■□□□□ 0.19
SKA3-205ENST00000465471 LINC01006Q8NI28 216 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms