RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 MOB1BQ7L9L4 216 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 MOB3BQ86TA1 216 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 ZNF554Q86TJ5 538 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 CROCCP3Q8IVE0 287 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 ODF3L1Q8IXM7 274 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 LINC00311Q8N616 119 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 SAMD12Q8N8I0 201 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 CFHR4Q92496 578 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 ST6GALNAC6Q969X2 333 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 CREB3L1Q96BA8 519 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 PHF21AQ96BD5 680 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 YPEL2Q96QA6 119 aa9.35□□□□□ -0.91
CUX1-207ENST00000465461 IGHV1-3A0A0C4DH29 117 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 BET1O15155 118 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 FABP7O15540 132 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 HSPA12AO43301 675 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 GAPDHP04406 335 aaKnown RBP9.34□□□□□ -0.91
CUX1-207ENST00000465461 EIF4EP06730 217 aaKnown RBP9.34□□□□□ -0.91
CUX1-207ENST00000465461 BRS3P32247 399 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 RPL5P46777 297 aaKnown RBP9.34□□□□□ -0.91
CUX1-207ENST00000465461 COMPP49747 757 aaPredicted RBP9.34□□□□□ -0.91
CUX1-207ENST00000465461 RORCP51449 518 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 SCAND1P57086 179 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 GNG2P59768 71 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 BLCAPP62952 87 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 HABP2Q14520 560 aaPredicted RBP9.34□□□□□ -0.91
CUX1-207ENST00000465461 TMEM30BQ3MIR4 351 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 UBE2NLQ5JXB2 153 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 HIST2H2BDQ6DRA6 164 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 C8orf31Q8N9H6 132 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 LINC01006Q8NI28 216 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 RTN4IP1Q8WWV3 396 aaPredicted RBP9.34□□□□□ -0.91
CUX1-207ENST00000465461 ABHD14BQ96IU4 210 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 ABHD14AQ9BUJ0 271 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.34□□□□□ -0.91
CUX1-207ENST00000465461 RNF150Q9ULK6 438 aa9.34□□□□□ -0.91
CUX1-207ENST00000465461 MEIS3P1A6NDR6 274 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 OOSP1A8MZH6 123 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 J3QRK9 145 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 HPGDSO60760 199 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 RGS11O94810 467 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 NDUFA7O95182 113 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 IGKV1D-33P01593 117 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 IGKV1-33P01594 117 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 GSTP1P09211 210 aaKnown RBP9.33□□□□□ -0.92
CUX1-207ENST00000465461 ZBTB25P24278 435 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 RAB7AP51149 207 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 KRTAP10-3P60369 221 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 ZNF816Q0VGE8 651 aaPredicted RBP9.33□□□□□ -0.92
CUX1-207ENST00000465461 HES1Q14469 280 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 Q3ZCU0 254 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 RPL39P5Q59GN2 51 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 CCDC144NLQ6NUI1 221 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 GVQW1Q8N7I0 195 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 C3orf56Q8N813 242 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 OR2AK2Q8NG84 335 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 OR4F5Q8NH21 305 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 S100A16Q96FQ6 103 aaKnown RBP9.33□□□□□ -0.92
CUX1-207ENST00000465461 C11orf54Q9H0W9 315 aaPredicted RBP9.33□□□□□ -0.92
CUX1-207ENST00000465461 ABCG5Q9H222 651 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 IFI27L2Q9H2X8 130 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 DIABLOQ9NR28 239 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 SCOCQ9UIL1 159 aa9.33□□□□□ -0.92
CUX1-207ENST00000465461 SAA2-SAA4A0A096LPE2 208 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 CLPSL1A2RUU4 121 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 FAM90A9PA6NNJ1 464 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 TMEM127O75204 238 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 TSPAN9O75954 239 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 SCGNO76038 276 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 SAA2P0DJI9 122 aaPredicted RBP9.32□□□□□ -0.92
CUX1-207ENST00000465461 IL3RAP26951 378 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 ARHGDIBP52566 201 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 ARL6IP1Q15041 203 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 PNLIPRP3Q17RR3 467 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 STEAP3Q658P3 488 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 TGIF2LXQ8IUE1 241 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 OR8H3Q8N146 312 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 OR4A4PQ8NGN8 299 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 SLC25A33Q9BSK2 321 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 MRPL20Q9BYC9 149 aaKnown RBP9.32□□□□□ -0.92
CUX1-207ENST00000465461 AUNIPQ9H7T9 357 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 ZNF702PQ9H963 129 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 BEX1Q9HBH7 125 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 RDH8Q9NYR8 311 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 PITPNC1Q9UKF7 332 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 MGAT4AQ9UM21 535 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 RNF114Q9Y508 228 aa9.32□□□□□ -0.92
CUX1-207ENST00000465461 TRBV6-7A0A0A0MS04 114 aa9.31□□□□□ -0.92
CUX1-207ENST00000465461 XRCC3O43542 346 aa9.31□□□□□ -0.92
CUX1-207ENST00000465461 FAM106CPP0CH98 169 aa9.31□□□□□ -0.92
CUX1-207ENST00000465461 ZNF182P17025 639 aaPredicted RBP9.31□□□□□ -0.92
CUX1-207ENST00000465461 TMEM11P17152 192 aa9.31□□□□□ -0.92
CUX1-207ENST00000465461 ELK1P19419 428 aa9.31□□□□□ -0.92
CUX1-207ENST00000465461 DTYMKP23919 212 aa9.31□□□□□ -0.92
CUX1-207ENST00000465461 KIR2DS4P43632 304 aa9.31□□□□□ -0.92
CUX1-207ENST00000465461 ZNF137PP52743 207 aa9.31□□□□□ -0.92
CUX1-207ENST00000465461 LINC00205P59089 165 aa9.31□□□□□ -0.92
CUX1-207ENST00000465461 TAS2R20P59543 309 aa9.31□□□□□ -0.92
CUX1-207ENST00000465461 RPL15P61313 204 aaKnown RBP9.31□□□□□ -0.92
CUX1-207ENST00000465461 KIR2DS1Q14954 304 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms