RNA–Protein interactions for RNA: ENST00000464266.1

HOXB3-203, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-203ENST00000464266 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.62□□□□□ -1.83
HOXB3-203ENST00000464266 IGKV1-27A0A075B6S5 117 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 IGHV5-10-1A0A0J9YXX1 117 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 ZNF705GA8MUZ8 300 aaPredicted RBP3.62□□□□□ -1.83
HOXB3-203ENST00000464266 EFCAB9A8MZ26 197 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 NDUFC2-KCTD14E9PQ53 114 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 F5H5K5 113 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 F5H768 121 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 CCRL2O00421 344 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 SSNA1O43805 119 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 SS18L1O75177 396 aaPredicted RBP3.62□□□□□ -1.83
HOXB3-203ENST00000464266 NQO1P15559 274 aaKnown RBP3.62□□□□□ -1.83
HOXB3-203ENST00000464266 UGT2B7P16662 529 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 CELP19835 753 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 ZBTB25P24278 435 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 TSPOP30536 169 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 GRPRP30550 384 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 PNOCQ13519 176 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 TBC1D28Q2M2D7 210 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 ACTBL2Q562R1 376 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 TCTEX1D4Q5JR98 221 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 TMEM255AQ5JRV8 349 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 GFI1BQ5VTD9 330 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 LAMTOR1Q6IAA8 161 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 XKRXQ6PP77 449 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 FAM183BPQ6ZVS7 135 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 MAPK1IP1LQ8NDC0 245 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 SNF8Q96H20 258 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 SMIM8Q96KF7 97 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 KCNS1Q96KK3 526 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 FAAP24Q9BTP7 215 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 GFRA4Q9GZZ7 299 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 TCEAL2Q9H3H9 227 aaPredicted RBP3.62□□□□□ -1.83
HOXB3-203ENST00000464266 ASB7Q9H672 318 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 PRO0628Q9UI54 55 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 ENPP4Q9Y6X5 453 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 CNTRLQ7Z7A1 2325 aa3.62□□□□□ -1.83
HOXB3-203ENST00000464266 MYO7BQ6PIF6 2116 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 IGHV3-66A0A0C4DH42 116 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 TLCD2A6NGC4 264 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 OR2AT4A6NND4 320 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 M0R1X1 148 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 PHYHO14832 338 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 HDAC3O15379 428 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 BIRC5O15392 142 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 SERPINB7O75635 380 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 DHRS3O75911 302 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 IFNA5P01569 189 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 CDK1P06493 297 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 ZNF7P17097 686 aaPredicted RBP3.61□□□□□ -1.83
HOXB3-203ENST00000464266 ATF1P18846 271 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 TAC1P20366 129 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 GATA2P23769 480 aaPredicted RBP3.61□□□□□ -1.83
HOXB3-203ENST00000464266 ZNF136P52737 540 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 NKX2-5P52952 324 aaPredicted RBP3.61□□□□□ -1.83
HOXB3-203ENST00000464266 SLC18A1P54219 525 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 GFERP55789 205 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 PFN3P60673 137 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 HBG1P69891 147 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 HBG2P69892 147 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 PRDX1Q06830 199 aaKnown RBP3.61□□□□□ -1.83
HOXB3-203ENST00000464266 PPIDQ08752 370 aaKnown RBP3.61□□□□□ -1.83
HOXB3-203ENST00000464266 ADIGQ0VDE8 80 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 MLLT11Q13015 90 aaPredicted RBP3.61□□□□□ -1.83
HOXB3-203ENST00000464266 DAZ2Q13117 558 aaKnown RBP3.61□□□□□ -1.83
HOXB3-203ENST00000464266 IL17AQ16552 155 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 IMPG1Q17R60 797 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 OTPQ5XKR4 325 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 IGFL3Q6UXB1 125 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 KRTAP1-3Q8IUG1 177 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 FDCSPQ8NFU4 85 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 OR1J4Q8NGS1 313 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 WFDC5Q8TCV5 224 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 FAM222BQ8WU58 562 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 RNF138Q8WVD3 245 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 GHSRQ92847 366 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 HGDQ93099 445 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 SMIM19Q96E16 107 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 OR10C1Q96KK4 312 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 KCTD7Q96MP8 289 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 CAMK2N2Q96S95 79 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 DERL2Q9GZP9 239 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 ARL6Q9H0F7 186 aa3.61□□□□□ -1.83
HOXB3-203ENST00000464266 METTL17Q9H7H0 456 aaPredicted RBP3.61□□□□□ -1.83
HOXB3-203ENST00000464266 DAZ3Q9NR90 486 aaKnown RBP3.61□□□□□ -1.83
HOXB3-203ENST00000464266 FBXO6Q9NRD1 293 aaPredicted RBP3.61□□□□□ -1.83
HOXB3-203ENST00000464266 IGLV11-55A0A075B6I3 123 aa3.6□□□□□ -1.83
HOXB3-203ENST00000464266 DAPL1A0PJW8 107 aa3.6□□□□□ -1.83
HOXB3-203ENST00000464266 ARGFXA6NJG6 315 aa3.6□□□□□ -1.83
HOXB3-203ENST00000464266 CEACAM18A8MTB9 384 aa3.6□□□□□ -1.83
HOXB3-203ENST00000464266 C21orf140B9A014 251 aa3.6□□□□□ -1.83
HOXB3-203ENST00000464266 KRBOX1C9JBD0 128 aa3.6□□□□□ -1.83
HOXB3-203ENST00000464266 UPK2O00526 184 aa3.6□□□□□ -1.83
HOXB3-203ENST00000464266 GPR171O14626 319 aa3.6□□□□□ -1.83
HOXB3-203ENST00000464266 CCDC22O60826 627 aa3.6□□□□□ -1.83
HOXB3-203ENST00000464266 CA11O75493 328 aa3.6□□□□□ -1.83
HOXB3-203ENST00000464266 REM1O75628 298 aa3.6□□□□□ -1.83
HOXB3-203ENST00000464266 CTDNEP1O95476 244 aa3.6□□□□□ -1.83
HOXB3-203ENST00000464266 MRPL3P09001 348 aaKnown RBP3.6□□□□□ -1.83
HOXB3-203ENST00000464266 CRISP3P54108 245 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms