RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 NAIPQ13075 1403 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 CUX1P39880 1505 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 PLXNC1O60486 1568 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 REREQ9P2R6 1566 aa2.32□□□□□ -2.04
USH2A-203ENST00000463147 WIZO95785 1651 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 IGHV3-21A0A0B4J1V1 117 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 TMEM150BA6NC51 233 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 OR5H14A6NHG9 310 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 ZNF98A6NK75 572 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 SMIM23A6NLE4 172 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 APOEP02649 317 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 REG1AP05451 166 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 GDI2P50395 445 aaKnown RBP2.31□□□□□ -2.04
USH2A-203ENST00000463147 LINC00313P59037 77 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 CXCR4P61073 352 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 MAGOHP61326 146 aaKnown RBP2.31□□□□□ -2.04
USH2A-203ENST00000463147 BASP1P80723 227 aaKnown RBP2.31□□□□□ -2.04
USH2A-203ENST00000463147 HPCAP84074 193 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 MMDQ15546 238 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 WHAMMP3Q1A5X7 153 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 TMEM69Q5SWH9 247 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 LRRN1Q6UXK5 716 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 CYHR1Q6ZMK1 362 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 HS3ST5Q8IZT8 346 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 KRTCAP2Q8N6L1 136 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 APCDD1LQ8NCL9 501 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 GPR32P1Q8NGA4 272 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 OR1P1Q8NH06 330 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 RAB8BQ92930 207 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 APOBEC3DQ96AK3 386 aaPredicted RBP2.31□□□□□ -2.04
USH2A-203ENST00000463147 TIPINQ9BVW5 301 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 YIPF3Q9GZM5 350 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 OR2D2Q9H210 308 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 VCX3BQ9H321 246 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 XPNPEP1Q9NQW7 623 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 PARVAQ9NVD7 372 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 A0A1W2PP64 1363 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 GAPVD1Q14C86 1478 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 FAM135AQ9P2D6 1515 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 SAMD9Q5K651 1589 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 CFAP43Q8NDM7 1665 aa2.31□□□□□ -2.04
USH2A-203ENST00000463147 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.3□□□□□ -2.04
USH2A-203ENST00000463147 ZNF729A6NN14 1252 aaPredicted RBP2.3□□□□□ -2.04
USH2A-203ENST00000463147 EVPLLA8MZ36 301 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 PFDN1O60925 122 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 ATP5HO75947 161 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 IGHG2P01859 326 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 IGLV7-43P04211 117 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 IL6P05231 212 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 RPSAP08865 295 aaKnown RBP2.3□□□□□ -2.04
USH2A-203ENST00000463147 OR13C7P0DN81 318 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 PTHLHP12272 177 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 NQO1P15559 274 aaKnown RBP2.3□□□□□ -2.04
USH2A-203ENST00000463147 CFL1P23528 166 aaKnown RBP2.3□□□□□ -2.04
USH2A-203ENST00000463147 RPL12P30050 165 aaKnown RBP2.3□□□□□ -2.04
USH2A-203ENST00000463147 ALDH3A1P30838 453 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 HOXA6P31267 233 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 CD79BP40259 229 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 CDKN2CP42773 168 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 REG1BP48304 166 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 PSMB3P49720 205 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 NUDT2P50583 147 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 TMEM267Q0VDI3 215 aaPredicted RBP2.3□□□□□ -2.04
USH2A-203ENST00000463147 IHHQ14623 411 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 PDGFRLQ15198 375 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 UAP1Q16222 522 aaPredicted RBP2.3□□□□□ -2.04
USH2A-203ENST00000463147 BCL2A1Q16548 175 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 RGS21Q2M5E4 152 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 ZCWPW2Q504Y3 356 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 LCN8Q6JVE9 175 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 SCGB1D4Q6XE38 83 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 CCDC121Q6ZUS5 278 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 ZNF615Q8N8J6 731 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 TMEM161BQ8NDZ6 487 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 OR11G2Q8NGC1 345 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 OR2V1Q8NHB1 315 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 PIGXQ8TBF5 258 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 OR52B2Q96RD2 323 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 GABARAPL1Q9H0R8 117 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 GTSF1LQ9H1H1 148 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 C11orf49Q9H6J7 331 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 PSTPIP2Q9H939 334 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 UBQLN4Q9NRR5 601 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 TAS2R9Q9NYW1 312 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 TMEM216Q9P0N5 145 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 DHCR7Q9UBM7 475 aaKnown RBP2.3□□□□□ -2.04
USH2A-203ENST00000463147 C3orf18Q9UK00 162 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 GUCA1BQ9UMX6 200 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 SNX10Q9Y5X0 201 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 ICOSQ9Y6W8 199 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 EVC2Q86UK5 1308 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 ERCC6Q03468 1493 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 TOP2AP11388 1531 aaKnown RBP2.3□□□□□ -2.04
USH2A-203ENST00000463147 MROH2BQ7Z745 1585 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 CFAP74Q9C0B2 1584 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 KIF14Q15058 1648 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 E9PCH4 1651 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 BCORL1Q5H9F3 1711 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 ADAMTSL1Q8N6G6 1762 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 CACNA1SQ13698 1873 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms