RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 MRGPRFQ96AM1 343 aa6.21□□□□□ -1.42
LSG1-205ENST00000461343 RRNAD1Q96FB5 475 aaKnown RBP6.21□□□□□ -1.42
LSG1-205ENST00000461343 C2orf50Q96LR7 162 aa6.21□□□□□ -1.42
LSG1-205ENST00000461343 TMEM56Q96MV1 263 aa6.21□□□□□ -1.42
LSG1-205ENST00000461343 CCL13Q99616 98 aa6.21□□□□□ -1.42
LSG1-205ENST00000461343 ABHD14AQ9BUJ0 271 aa6.21□□□□□ -1.42
LSG1-205ENST00000461343 GON7Q9BXV9 100 aa6.21□□□□□ -1.42
LSG1-205ENST00000461343 GFOD1Q9NXC2 390 aa6.21□□□□□ -1.42
LSG1-205ENST00000461343 IDI2-AS1Q9NZ38 188 aa6.21□□□□□ -1.42
LSG1-205ENST00000461343 ZNF581Q9P0T4 197 aa6.21□□□□□ -1.42
LSG1-205ENST00000461343 AMMECR1Q9Y4X0 333 aaPredicted RBP6.21□□□□□ -1.42
LSG1-205ENST00000461343 MAB21L2Q9Y586 359 aa6.21□□□□□ -1.42
LSG1-205ENST00000461343 TMEM56-RWDD3S4R434 201 aa6.21□□□□□ -1.42
LSG1-205ENST00000461343 IGKV1-6A0A0C4DH72 117 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 A0A1B0GU03 582 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 A0A1B0GW55 424 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 FAM90A9PA6NNJ1 464 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 C15orf65H3BRN8 121 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 DVL1O14640 695 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 RBFOX2O43251 390 aaKnown RBP eCLIP6.2□□□□□ -1.42
LSG1-205ENST00000461343 SIAH2O43255 324 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 TXNL1O43396 289 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 PGLYRP1O75594 196 aaPredicted RBP6.2□□□□□ -1.42
LSG1-205ENST00000461343 RP2O75695 350 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 OR2F2O95006 317 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 IGHV2-70P01814 119 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 OR5AC1P0C628 307 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 OR8U9P0C7N5 309 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 DUX4L2P0CJ85 424 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 DUX4L3P0CJ86 424 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 DUX4L4P0CJ87 422 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 DUX4L5P0CJ88 424 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 DUX4L6P0CJ89 424 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 DUX4L7P0CJ90 424 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 SLC25A4P12235 298 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 CXCL3P19876 107 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 PSMB6P28072 239 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 SSTR2P30874 369 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 CEBPDP49716 269 aaPredicted RBP6.2□□□□□ -1.42
LSG1-205ENST00000461343 PDLIM4P50479 330 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 PRRX1P54821 245 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 ERVK-16P61578 105 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 OR2F1Q13607 317 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 ZNF345Q14585 488 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 GNMTQ14749 295 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 CDSNQ15517 529 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 SLC9A3R2Q15599 337 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 PHLDA2Q53GA4 152 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 OR52B4Q8NGK2 314 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 OR13A1Q8NGR1 328 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 OR8U1Q8NH10 309 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 H1FXQ92522 213 aaKnown RBP6.2□□□□□ -1.42
LSG1-205ENST00000461343 NEUROG1Q92886 237 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 LSM10Q969L4 123 aaKnown RBP6.2□□□□□ -1.42
LSG1-205ENST00000461343 TMEM230Q96A57 120 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 CCL19Q99731 98 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 TMEM246Q9BRR3 403 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 CHIAQ9BZP6 476 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 OR2D2Q9H210 308 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 DUX4Q9UBX2 424 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 RPUSD1Q9UJJ7 312 aaKnown RBP6.2□□□□□ -1.42
LSG1-205ENST00000461343 SPENQ96T58 3664 aaKnown RBP6.2□□□□□ -1.42
LSG1-205ENST00000461343 CACNA1DQ01668 2161 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 ARFGEF3Q5TH69 2177 aa6.2□□□□□ -1.42
LSG1-205ENST00000461343 C13orf42A0A1B0GVH6 325 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 FAM90A26D6RGX4 464 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 BOLA2-SMG1P6H3BVE0 249 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 M0R1W7 72 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 TOR1AO14656 332 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 HSD17B6O14756 317 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 TNFRSF13BO14836 293 aaPredicted RBP6.19□□□□□ -1.42
LSG1-205ENST00000461343 ENSAO43768 121 aaKnown RBP6.19□□□□□ -1.42
LSG1-205ENST00000461343 GPR137BO60478 399 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 MED6O75586 246 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 SOD3P08294 240 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 MMP9P14780 707 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 PI3P19957 117 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 SSTR5P35346 364 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 THBS3P49746 956 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 RAB13P51153 203 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 ERVFRD-1P60508 538 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 GNB2P62879 340 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 SUPT4H1P63272 117 aaKnown RBP6.19□□□□□ -1.42
LSG1-205ENST00000461343 TMEM187Q14656 261 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 RTL8BQ17RB0 113 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 IAH1Q2TAA2 248 aaPredicted RBP6.19□□□□□ -1.42
LSG1-205ENST00000461343 MORN2Q502X0 79 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 EIF5AL1Q6IS14 154 aaKnown RBP6.19□□□□□ -1.42
LSG1-205ENST00000461343 C11orf87Q6NUJ2 197 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 CLEC2AQ6UVW9 174 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 ZNF818PQ6ZRF7 136 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 C1orf122Q6ZSJ8 110 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 KIR3DL3Q8N743 410 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 FAM216BQ8N7L0 139 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 OR1L1Q8NH94 360 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 C8orf46Q8TAG6 207 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 ZNF596Q8TC21 504 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 TMEM186Q96B77 213 aa6.19□□□□□ -1.42
LSG1-205ENST00000461343 FYTTD1Q96QD9 318 aaKnown RBP6.19□□□□□ -1.42
LSG1-205ENST00000461343 PIMREGQ9BSJ6 248 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms