RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 HTR1DP28221 377 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 TALDO1P37837 337 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 DAPP51397 102 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 CRISP3P54108 245 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 CDKN2DP55273 166 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 TPI1P60174 286 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 RAB8AP61006 207 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 MGAT3Q09327 533 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 RBMY1FQ15415 496 aaKnown RBP2.04□□□□□ -2.08
HPS3-203ENST00000460822 TOMM34Q15785 309 aaPredicted RBP2.04□□□□□ -2.08
HPS3-203ENST00000460822 ZNF79Q15937 498 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 SLC36A2Q495M3 483 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 FBXW9Q5XUX1 488 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 LAMTOR1Q6IAA8 161 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 MED27Q6P2C8 311 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 ENTHD1Q8IYW4 607 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 C2orf73Q8N5S3 287 aaPredicted RBP2.04□□□□□ -2.08
HPS3-203ENST00000460822 YIPF7Q8N8F6 280 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.04□□□□□ -2.08
HPS3-203ENST00000460822 Q8N9W7 124 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 OR6N1Q8NGY5 312 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 OR10A6Q8NH74 314 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 CDC26Q8NHZ8 85 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 LHFPL5Q8TAF8 219 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 PIFOQ8TCI5 191 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 ZNF675Q8TD23 568 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 BLOC1S5Q8TDH9 187 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 DEDD2Q8WXF8 326 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 CEP19Q96LK0 163 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 TMEM56Q96MV1 263 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 PITX2Q99697 317 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 ASB7Q9H672 318 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 HEBP1Q9NRV9 189 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 RBFOX1Q9NWB1 397 aaKnown RBP2.04□□□□□ -2.08
HPS3-203ENST00000460822 GLTPQ9NZD2 209 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 HELZP42694 1942 aaKnown RBP2.04□□□□□ -2.08
HPS3-203ENST00000460822 NLRC5Q86WI3 1866 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 KIF26AQ9ULI4 1882 aaPredicted RBP2.04□□□□□ -2.08
HPS3-203ENST00000460822 PAPPA2Q9BXP8 1791 aa2.04□□□□□ -2.08
HPS3-203ENST00000460822 IGKV6-21A0A0C4DH24 114 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 LINC00862A6NCI5 91 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 TMEM210A6NLX4 147 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 FTCDNL1E5RQL4 147 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 ATP6V1G2-DDX39BF2Z307 99 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 I3L521 148 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 HCRTO43612 131 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 NDUFA2O43678 99 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 OR2B3O76000 313 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 SERPINA1P01009 418 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 CDK1P06493 297 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 CTSLP07711 333 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 COX5BP10606 129 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 IL1RNP18510 177 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 OMGP23515 440 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 CFL1P23528 166 aaKnown RBP2.03□□□□□ -2.08
HPS3-203ENST00000460822 ARPP19P56211 112 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 HERVK_113P61574 105 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 B2MP61769 119 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 SNRPD2P62316 118 aaKnown RBP2.03□□□□□ -2.08
HPS3-203ENST00000460822 PSPHP78330 225 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 HOXC5Q00444 222 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 ADIGQ0VDE8 80 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 SHHQ15465 462 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 TTC32Q5I0X7 151 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 SAPCD1Q5SSQ6 148 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 SCIMPQ6UWF3 145 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 RTL4Q6ZR62 310 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 USP50Q70EL3 339 aaPredicted RBP2.03□□□□□ -2.08
HPS3-203ENST00000460822 MSRB3Q8IXL7 192 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 LGI3Q8N145 548 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 C10orf111Q8N326 155 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 C19orf18Q8NEA5 215 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 MRAP2Q96G30 205 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 NRTNQ99748 197 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 TMED9Q9BVK6 235 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 SLC22A4Q9H015 551 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 ABCB9Q9NP78 766 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 DNAJC27Q9NZQ0 273 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 PCTPQ9UKL6 214 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 NEU3Q9UQ49 428 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 SIGLEC7Q9Y286 467 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 TBL2Q9Y4P3 447 aaKnown RBP2.03□□□□□ -2.08
HPS3-203ENST00000460822 POLR3HQ9Y535 204 aaPredicted RBP2.03□□□□□ -2.08
HPS3-203ENST00000460822 HSPB11Q9Y547 144 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 PLXNA3P51805 1871 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 CENPFP49454 3210 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 DNAH12Q6ZR08 3092 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 TRAV8-6A0A0B4J262 113 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 OR51F1A6NGY5 319 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 CCL22O00626 93 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 MYL12BO14950 172 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 RGS5O15539 181 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 HPGDSO60760 199 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 SS18L1O75177 396 aaPredicted RBP2.03□□□□□ -2.08
HPS3-203ENST00000460822 SRSF10O75494 262 aaKnown RBP2.03□□□□□ -2.08
HPS3-203ENST00000460822 RP2O75695 350 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 SLC22A5O76082 557 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 SLC25A27O95847 323 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 TRBV12-3P01733 135 aa2.03□□□□□ -2.08
HPS3-203ENST00000460822 HLA-DQB2P05538 268 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms