RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SSX2Q16385 188 aa18.17■□□□□ 0.5
C9orf3-209ENST00000460573 LDLRAD2Q5SZI1 272 aa18.17■□□□□ 0.5
C9orf3-209ENST00000460573 C5orf24Q7Z6I8 188 aa18.17■□□□□ 0.5
C9orf3-209ENST00000460573 ZDHHC22Q8N966 263 aa18.17■□□□□ 0.5
C9orf3-209ENST00000460573 OR5R1Q8NH85 324 aa18.17■□□□□ 0.5
C9orf3-209ENST00000460573 MCFD2Q8NI22 146 aa18.17■□□□□ 0.5
C9orf3-209ENST00000460573 CABLES2Q9BTV7 478 aa18.17■□□□□ 0.5
C9orf3-209ENST00000460573 C6orf62Q9GZU0 229 aaPredicted RBP18.17■□□□□ 0.5
C9orf3-209ENST00000460573 SLC23A1Q9UHI7 598 aa18.17■□□□□ 0.5
C9orf3-209ENST00000460573 BTBD17A6NE02 478 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 VGLL3A8MV65 326 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 LY6LH3BQJ8 138 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 ITGB1BP1O14713 200 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 HOXA3O43365 443 aaPredicted RBP18.16■□□□□ 0.5
C9orf3-209ENST00000460573 HLA-DQB1P01920 261 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 CTXN2P0C2S0 81 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 GSTT2P0CG29 244 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 GSTT2BP0CG30 244 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 PPP1CCP36873 323 aaKnown RBP18.16■□□□□ 0.5
C9orf3-209ENST00000460573 LRRC75BQ2VPJ9 315 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 TPTE2P1Q5T6R2 138 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 CCDC144NLQ6NUI1 221 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 DTX3Q8N9I9 347 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 MAFIPQ8WZ33 124 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 DCUN1D5Q9BTE7 237 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 TOLLIPQ9H0E2 274 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 MIXL1Q9H2W2 232 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 RABL2AQ9UBK7 228 aaPredicted RBP18.16■□□□□ 0.5
C9orf3-209ENST00000460573 EXTL2Q9UBQ6 330 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 RABL2BQ9UNT1 228 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 MRPS7Q9Y2R9 242 aaKnown RBP18.16■□□□□ 0.5
C9orf3-209ENST00000460573 HILPDAQ9Y5L2 63 aa18.16■□□□□ 0.5
C9orf3-209ENST00000460573 A0A1W2PPE3 182 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 DNAJC9-AS1A6NH13 148 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 CEACAM6P40199 344 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 DYNLT3P51808 116 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 ZNF134P52741 427 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 GNMTQ14749 295 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 SLC9A3R2Q15599 337 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 CT45A1Q5HYN5 189 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 CNIH2Q6PI25 160 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 HOGA1Q86XE5 327 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 LAX1Q8IWV1 398 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 C3orf56Q8N813 242 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 OR2AK2Q8NG84 335 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 OR10J5Q8NHC4 309 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 CT45A3Q8NHU0 189 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 FAM216AQ8WUB2 273 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 EDARADDQ8WWZ3 215 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 RPEQ96AT9 228 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 TSC22D3Q99576 134 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 ABHD14AQ9BUJ0 271 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 MMP27Q9H306 513 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 GHITMQ9H3K2 345 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 SCPEP1Q9HB40 452 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 ESM1Q9NQ30 184 aa18.15■□□□□ 0.5
C9orf3-209ENST00000460573 TRBV6-7A0A0A0MS04 114 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 IGKV1-6A0A0C4DH72 117 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 SULT1C2O00338 296 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 PTHLHP12272 177 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 RAB7AP51149 207 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 UBA52P62987 128 aaKnown RBP18.14■□□□□ 0.49
C9orf3-209ENST00000460573 HERPUD1Q15011 391 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 FAM53AQ6NSI3 398 aaPredicted RBP18.14■□□□□ 0.49
C9orf3-209ENST00000460573 LINC00299Q6ZSB3 139 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 DYNAPQ8N1N2 210 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 BEST4Q8NFU0 473 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 TOMM40LQ969M1 308 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 SSX3Q99909 188 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 ABCB10Q9NRK6 738 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 ANXA10Q9UJ72 324 aa18.14■□□□□ 0.49
C9orf3-209ENST00000460573 IGHV4-59P01825 116 aa18.13■□□□□ 0.49
C9orf3-209ENST00000460573 LPLP06858 475 aa18.13■□□□□ 0.49
C9orf3-209ENST00000460573 BRS3P32247 399 aa18.13■□□□□ 0.49
C9orf3-209ENST00000460573 ZNF137PP52743 207 aa18.13■□□□□ 0.49
C9orf3-209ENST00000460573 IGSF11Q5DX21 431 aa18.13■□□□□ 0.49
C9orf3-209ENST00000460573 DIRAS2Q96HU8 199 aa18.13■□□□□ 0.49
C9orf3-209ENST00000460573 IFT46Q9NQC8 304 aa18.13■□□□□ 0.49
C9orf3-209ENST00000460573 OR1A1Q9P1Q5 309 aa18.13■□□□□ 0.49
C9orf3-209ENST00000460573 IGKV1D-8A0A087WSZ0 117 aa18.12■□□□□ 0.49
C9orf3-209ENST00000460573 BET1O15155 118 aa18.12■□□□□ 0.49
C9orf3-209ENST00000460573 SLC31A2O15432 143 aa18.12■□□□□ 0.49
C9orf3-209ENST00000460573 GAPDHP04406 335 aaKnown RBP18.12■□□□□ 0.49
C9orf3-209ENST00000460573 RNASE1P07998 156 aaKnown RBP18.12■□□□□ 0.49
C9orf3-209ENST00000460573 ZNF816Q0VGE8 651 aaPredicted RBP18.12■□□□□ 0.49
C9orf3-209ENST00000460573 SNX29P2Q8IUI4 249 aa18.12■□□□□ 0.49
C9orf3-209ENST00000460573 GPX8Q8TED1 209 aa18.12■□□□□ 0.49
C9orf3-209ENST00000460573 HSD17B6O14756 317 aa18.11■□□□□ 0.49
C9orf3-209ENST00000460573 TXNL1O43396 289 aa18.11■□□□□ 0.49
C9orf3-209ENST00000460573 OR8H3Q8N146 312 aa18.11■□□□□ 0.49
C9orf3-209ENST00000460573 LYG1Q8N1E2 194 aa18.11■□□□□ 0.49
C9orf3-209ENST00000460573 GVQW1Q8N7I0 195 aa18.11■□□□□ 0.49
C9orf3-209ENST00000460573 ST6GALNAC6Q969X2 333 aa18.11■□□□□ 0.49
C9orf3-209ENST00000460573 GINS4Q9BRT9 223 aa18.11■□□□□ 0.49
C9orf3-209ENST00000460573 RDH8Q9NYR8 311 aa18.11■□□□□ 0.49
C9orf3-209ENST00000460573 PIPOXQ9P0Z9 390 aa18.11■□□□□ 0.49
C9orf3-209ENST00000460573 ANAPC10Q9UM13 185 aa18.11■□□□□ 0.49
C9orf3-209ENST00000460573 H3BUX3 64 aa18.1■□□□□ 0.49
C9orf3-209ENST00000460573 S100A5P33763 92 aa18.1■□□□□ 0.49
C9orf3-209ENST00000460573 ARPC4P59998 168 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms