RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 GNB3P16520 340 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 TMEM69Q5SWH9 247 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 LHFPL4Q7Z7J7 247 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 OR10J5Q8NHC4 309 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 ADTRPQ96IZ2 230 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 PRSS22Q9GZN4 317 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 A0A0B4J203 849 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 SMIM30A4D0T7 59 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 RAB29O14966 203 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 GINS4Q9BRT9 223 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 CHIAQ9BZP6 476 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 IFT46Q9NQC8 304 aa8.64□□□□□ -1.03
UBR4-208ENST00000459947 SONP18583 2426 aaKnown RBP8.64□□□□□ -1.03
UBR4-208ENST00000459947 A0A075B6Q4 140 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 TSPAN9O75954 239 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 CBX3Q13185 183 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 HABP2Q14520 560 aaPredicted RBP8.63□□□□□ -1.03
UBR4-208ENST00000459947 PRR18Q8N4B5 295 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 OR5H6Q8NGV6 325 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 OR2T10Q8NGZ9 312 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 HILPDAQ9Y5L2 63 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 TRAV39A0A0B4J263 110 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 MC5RP33032 325 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 ARPC4P59998 168 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 ACTBL2Q562R1 376 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 IL1F10Q8WWZ1 152 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 RNF5Q99942 180 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 A3GALT2U3KPV4 340 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 CLPSL1A2RUU4 121 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 FAM90A9PA6NNJ1 464 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 FGF16O43320 207 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 TAS2R46P59540 309 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 MOGAT2Q3SYC2 334 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 MOB4Q9Y3A3 225 aa8.63□□□□□ -1.03
UBR4-208ENST00000459947 MTORP42345 2549 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 TRBV6-7A0A0A0MS04 114 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 MEX3AA1L020 520 aaKnown RBP8.62□□□□□ -1.03
UBR4-208ENST00000459947 FAM25AB3EWG3 89 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 FAM25CB3EWG5 89 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 FAM25GB3EWG6 89 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 RRASP10301 218 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 PRSS3P35030 304 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 RAB13P51153 203 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 SSBP1Q04837 148 aaKnown RBP8.62□□□□□ -1.03
UBR4-208ENST00000459947 EBI3Q14213 229 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 LYG1Q8N1E2 194 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 OR52L2PQ8NGH6 319 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 IGHV3-43A0A0B4J1X8 118 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 FAM181BA6NEQ2 426 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 OR5H14A6NHG9 310 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 IGHV3-43DP0DP04 118 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 HOGA1Q86XE5 327 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 OR10V1Q8NGI7 309 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 OR2T6Q8NHC8 308 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 RTN4IP1Q8WWV3 396 aaPredicted RBP8.62□□□□□ -1.03
UBR4-208ENST00000459947 KCNK7Q9Y2U2 307 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 IGHV1-3A0A0C4DH29 117 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 ST8SIA5O15466 376 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 PPP1CCP36873 323 aaKnown RBP8.62□□□□□ -1.03
UBR4-208ENST00000459947 DLX1P56177 255 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 CT45A1Q5HYN5 189 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 OLFML2AQ68BL7 652 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 ZNF833PQ6ZTB9 187 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 MOB3BQ86TA1 216 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 CT45A3Q8NHU0 189 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 ST6GALNAC6Q969X2 333 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 RBM14Q96PK6 669 aaKnown RBP8.62□□□□□ -1.03
UBR4-208ENST00000459947 COMMD3Q9UBI1 195 aa8.62□□□□□ -1.03
UBR4-208ENST00000459947 TEP1Q99973 2627 aaKnown RBP8.62□□□□□ -1.03
UBR4-208ENST00000459947 A0A1W2PPI3 338 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 TMEM235A6NFC5 223 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 APOA2P02652 100 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 CEACAM6P40199 344 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 TAS2R20P59543 309 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 NECAP2Q9NVZ3 263 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 TMEM11P17152 192 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 RCVRNP35243 200 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 GPR12P47775 334 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 PLA2G7Q13093 441 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 ZBTB34Q8NCN2 500 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 ISOC1Q96CN7 298 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 HDHD3Q9BSH5 251 aaPredicted RBP8.61□□□□□ -1.03
UBR4-208ENST00000459947 SLC25A33Q9BSK2 321 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 ZNF107Q9UII5 783 aaPredicted RBP8.61□□□□□ -1.03
UBR4-208ENST00000459947 ANXA10Q9UJ72 324 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 RBM7Q9Y580 266 aaKnown RBP8.61□□□□□ -1.03
UBR4-208ENST00000459947 FAM172BPA6NC97 362 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 CCDC160A6NGH7 325 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 TBPP20226 339 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 ACTBP60709 375 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 PRB3Q04118 309 aaPredicted RBP8.61□□□□□ -1.03
UBR4-208ENST00000459947 SHISA2Q6UWI4 295 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 RDH8Q9NYR8 311 aa8.61□□□□□ -1.03
UBR4-208ENST00000459947 RSL24D1Q9UHA3 163 aaKnown RBP8.61□□□□□ -1.03
UBR4-208ENST00000459947 TIMM23O14925 209 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 MOSP00540 346 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 ARSJQ5FYB0 599 aaPredicted RBP8.6□□□□□ -1.03
UBR4-208ENST00000459947 H1FOOQ8IZA3 346 aaPredicted RBP8.6□□□□□ -1.03
UBR4-208ENST00000459947 BEST4Q8NFU0 473 aa8.6□□□□□ -1.03
UBR4-208ENST00000459947 ZNF747Q9BV97 191 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms