RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 FCGR3AP08637 254 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 GSTP1P09211 210 aaKnown RBP17.46■□□□□ 0.39
SSNA1-202ENST00000459860 FAM106CPP0CH98 169 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 ZBTB25P24278 435 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 CD24P25063 80 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 CDNFQ49AH0 187 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 CT45A1Q5HYN5 189 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 CCBE1Q6UXH8 406 aaPredicted RBP17.46■□□□□ 0.39
SSNA1-202ENST00000459860 C5orf24Q7Z6I8 188 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 ANKRD13BQ86YJ7 626 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 LYG1Q8N1E2 194 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 OR5H6Q8NGV6 325 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 OR56B4Q8NH76 319 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 CT45A3Q8NHU0 189 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 C16orf95Q9H693 158 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.46■□□□□ 0.39
SSNA1-202ENST00000459860 SLC23A1Q9UHI7 598 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 RNF114Q9Y508 228 aa17.46■□□□□ 0.39
SSNA1-202ENST00000459860 A0A0A6YYH2 397 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 A6NJ64 397 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 KCNAB3O43448 404 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 GABARAPO95166 117 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 REG1BP48304 166 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 DIAPH2-AS1Q14236 149 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 HES1Q14469 280 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 GPR107Q5VW38 600 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 MOB3BQ86TA1 216 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 TGIF2LXQ8IUE1 241 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 DRAM1Q8N682 238 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 OR4A4PQ8NGN8 299 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 OR2T6Q8NHC8 308 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 LINC01006Q8NI28 216 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 EDARADDQ8WWZ3 215 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 SLC25A46Q96AG3 418 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 ZNF747Q9BV97 191 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 DIABLOQ9NR28 239 aa17.45■□□□□ 0.38
SSNA1-202ENST00000459860 IGHV1-3A0A0C4DH29 117 aa17.44■□□□□ 0.38
SSNA1-202ENST00000459860 SNRNP70P08621 437 aaKnown RBP17.44■□□□□ 0.38
SSNA1-202ENST00000459860 SCTP09683 121 aa17.44■□□□□ 0.38
SSNA1-202ENST00000459860 ALDH3B2P48448 385 aa17.44■□□□□ 0.38
SSNA1-202ENST00000459860 ZNF134P52741 427 aa17.44■□□□□ 0.38
SSNA1-202ENST00000459860 ZNF137PP52743 207 aa17.44■□□□□ 0.38
SSNA1-202ENST00000459860 GNG2P59768 71 aa17.44■□□□□ 0.38
SSNA1-202ENST00000459860 PITPNAQ00169 270 aa17.44■□□□□ 0.38
SSNA1-202ENST00000459860 ARSJQ5FYB0 599 aaPredicted RBP17.44■□□□□ 0.38
SSNA1-202ENST00000459860 RTN4IP1Q8WWV3 396 aaPredicted RBP17.44■□□□□ 0.38
SSNA1-202ENST00000459860 KCTD12Q96CX2 325 aaKnown RBP17.44■□□□□ 0.38
SSNA1-202ENST00000459860 SLC25A38Q96DW6 304 aa17.44■□□□□ 0.38
SSNA1-202ENST00000459860 SLC25A33Q9BSK2 321 aa17.44■□□□□ 0.38
SSNA1-202ENST00000459860 FABP7O15540 132 aa17.43■□□□□ 0.38
SSNA1-202ENST00000459860 OR2F2O95006 317 aa17.43■□□□□ 0.38
SSNA1-202ENST00000459860 TFAP2AP05549 437 aa17.43■□□□□ 0.38
SSNA1-202ENST00000459860 DTYMKP23919 212 aa17.43■□□□□ 0.38
SSNA1-202ENST00000459860 PNLIPRP3Q17RR3 467 aa17.43■□□□□ 0.38
SSNA1-202ENST00000459860 PRR31Q5SQ13 230 aa17.43■□□□□ 0.38
SSNA1-202ENST00000459860 HACD4Q5VWC8 232 aa17.43■□□□□ 0.38
SSNA1-202ENST00000459860 SHISA2Q6UWI4 295 aa17.43■□□□□ 0.38
SSNA1-202ENST00000459860 THNSL2Q86YJ6 484 aa17.43■□□□□ 0.38
SSNA1-202ENST00000459860 CFHR4Q92496 578 aa17.43■□□□□ 0.38
SSNA1-202ENST00000459860 ST6GALNAC6Q969X2 333 aa17.43■□□□□ 0.38
SSNA1-202ENST00000459860 PRSS22Q9GZN4 317 aa17.43■□□□□ 0.38
SSNA1-202ENST00000459860 TMEM11P17152 192 aa17.42■□□□□ 0.38
SSNA1-202ENST00000459860 CEACAM6P40199 344 aa17.42■□□□□ 0.38
SSNA1-202ENST00000459860 UBE2NLQ5JXB2 153 aa17.42■□□□□ 0.38
SSNA1-202ENST00000459860 C11orf88Q6PI97 169 aa17.42■□□□□ 0.38
SSNA1-202ENST00000459860 RBM14Q96PK6 669 aaKnown RBP17.42■□□□□ 0.38
SSNA1-202ENST00000459860 NAA50Q9GZZ1 169 aaKnown RBP17.42■□□□□ 0.38
SSNA1-202ENST00000459860 PIPOXQ9P0Z9 390 aa17.42■□□□□ 0.38
SSNA1-202ENST00000459860 OR1A1Q9P1Q5 309 aa17.42■□□□□ 0.38
SSNA1-202ENST00000459860 TRAV18A0A075B6X5 111 aa17.41■□□□□ 0.38
SSNA1-202ENST00000459860 TMEM235A6NFC5 223 aa17.41■□□□□ 0.38
SSNA1-202ENST00000459860 M0QZK8 103 aa17.41■□□□□ 0.38
SSNA1-202ENST00000459860 LANCL1O43813 399 aa17.41■□□□□ 0.38
SSNA1-202ENST00000459860 SRSF7Q16629 238 aaKnown RBP eCLIP17.41■□□□□ 0.38
SSNA1-202ENST00000459860 ZNF260Q3ZCT1 412 aa17.41■□□□□ 0.38
SSNA1-202ENST00000459860 SAMD12Q8N8I0 201 aa17.41■□□□□ 0.38
SSNA1-202ENST00000459860 WFDC12Q8WWY7 111 aa17.41■□□□□ 0.38
SSNA1-202ENST00000459860 MAFIPQ8WZ33 124 aa17.41■□□□□ 0.38
SSNA1-202ENST00000459860 S100A16Q96FQ6 103 aaKnown RBP17.41■□□□□ 0.38
SSNA1-202ENST00000459860 GHITMQ9H3K2 345 aa17.41■□□□□ 0.38
SSNA1-202ENST00000459860 ZNF230Q9UIE0 474 aaPredicted RBP17.41■□□□□ 0.38
SSNA1-202ENST00000459860 FAM90A9PA6NNJ1 464 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 ITGB1BP1O14713 200 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 BET1O15155 118 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 ST8SIA5O15466 376 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 DIRAS3O95661 229 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 IGKV1D-33P01593 117 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 IGKV1-33P01594 117 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 RORCP51449 518 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 HABP2Q14520 560 aaPredicted RBP17.4■□□□□ 0.38
SSNA1-202ENST00000459860 CTF1Q16619 201 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 IZUMO1Q8IYV9 350 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 OR10J5Q8NHC4 309 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 NUDCD2Q8WVJ2 157 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 ACOT12Q8WYK0 555 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 AP3S1Q92572 193 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 S1PR3Q99500 378 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 ABCG5Q9H222 651 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 DCSTAMPQ9H295 470 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 ELF5Q9UKW6 265 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms