RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 SERTAD4Q9NUC0 356 aa16.57■□□□□ 0.24
VARS-218ENST00000459667 SCGNO76038 276 aa16.56■□□□□ 0.24
VARS-218ENST00000459667 RGS11O94810 467 aa16.56■□□□□ 0.24
VARS-218ENST00000459667 LPLP06858 475 aa16.56■□□□□ 0.24
VARS-218ENST00000459667 TMEM11P17152 192 aa16.56■□□□□ 0.24
VARS-218ENST00000459667 ZNF137PP52743 207 aa16.56■□□□□ 0.24
VARS-218ENST00000459667 LSM3P62310 102 aaKnown RBP16.56■□□□□ 0.24
VARS-218ENST00000459667 HERPUD1Q15011 391 aa16.56■□□□□ 0.24
VARS-218ENST00000459667 MOGAT2Q3SYC2 334 aa16.56■□□□□ 0.24
VARS-218ENST00000459667 IDNKQ5T6J7 187 aa16.56■□□□□ 0.24
VARS-218ENST00000459667 STEAP3Q658P3 488 aa16.56■□□□□ 0.24
VARS-218ENST00000459667 CMSS1Q9BQ75 279 aaKnown RBP16.56■□□□□ 0.24
VARS-218ENST00000459667 ABHD14AQ9BUJ0 271 aa16.56■□□□□ 0.24
VARS-218ENST00000459667 ATG5Q9H1Y0 275 aa16.56■□□□□ 0.24
VARS-218ENST00000459667 MOB4Q9Y3A3 225 aa16.56■□□□□ 0.24
VARS-218ENST00000459667 M0QZ24 198 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 M0QZK8 103 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 YPEL1O60688 119 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 PEX14O75381 377 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 IGKV1D-33P01593 117 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 IGKV1-33P01594 117 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 CD3GP09693 182 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 SNRPBP14678 240 aaKnown RBP16.55■□□□□ 0.24
VARS-218ENST00000459667 VDAC2P45880 294 aaPredicted RBP16.55■□□□□ 0.24
VARS-218ENST00000459667 HLA-DRB3P79483 266 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 TMEM95Q3KNT9 176 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 ABCA11PQ4W5N1 156 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 TGIF2LXQ8IUE1 241 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 LYG1Q8N1E2 194 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 LGALS14Q8TCE9 139 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 YPEL2Q96QA6 119 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 ETV7Q9Y603 341 aa16.55■□□□□ 0.24
VARS-218ENST00000459667 IGHV3-72A0A0B4J1Y9 119 aa16.54■□□□□ 0.24
VARS-218ENST00000459667 TXNL1O43396 289 aa16.54■□□□□ 0.24
VARS-218ENST00000459667 LY6G6FQ5SQ64 297 aa16.54■□□□□ 0.24
VARS-218ENST00000459667 IZUMO1Q8IYV9 350 aa16.54■□□□□ 0.24
VARS-218ENST00000459667 OR2AK2Q8NG84 335 aa16.54■□□□□ 0.24
VARS-218ENST00000459667 PHF21AQ96BD5 680 aa16.54■□□□□ 0.24
VARS-218ENST00000459667 Q9N2K0 584 aa16.54■□□□□ 0.24
VARS-218ENST00000459667 A0A075B6Q4 140 aa16.53■□□□□ 0.24
VARS-218ENST00000459667 SERPINE3A8MV23 424 aa16.53■□□□□ 0.24
VARS-218ENST00000459667 RAB27BO00194 218 aa16.53■□□□□ 0.24
VARS-218ENST00000459667 AMY1AP04745 511 aa16.53■□□□□ 0.24
VARS-218ENST00000459667 AMY2AP04746 511 aa16.53■□□□□ 0.24
VARS-218ENST00000459667 HIST1H1DP16402 221 aaKnown RBP16.53■□□□□ 0.24
VARS-218ENST00000459667 HNF4GQ14541 408 aa16.53■□□□□ 0.24
VARS-218ENST00000459667 C11orf44Q8N8P7 122 aa16.53■□□□□ 0.24
VARS-218ENST00000459667 KCNK7Q9Y2U2 307 aa16.53■□□□□ 0.24
VARS-218ENST00000459667 TET2Q6N021 2002 aaPredicted RBP16.52■□□□□ 0.24
VARS-218ENST00000459667 SH2D7A6NKC9 451 aaPredicted RBP16.52■□□□□ 0.24
VARS-218ENST00000459667 MFNGO00587 321 aa16.52■□□□□ 0.24
VARS-218ENST00000459667 LANCL1O43813 399 aa16.52■□□□□ 0.24
VARS-218ENST00000459667 GNB3P16520 340 aa16.52■□□□□ 0.24
VARS-218ENST00000459667 SERPINB10P48595 397 aa16.52■□□□□ 0.24
VARS-218ENST00000459667 EBI3Q14213 229 aa16.52■□□□□ 0.24
VARS-218ENST00000459667 TREML4Q6UXN2 200 aa16.52■□□□□ 0.24
VARS-218ENST00000459667 GPR141Q7Z602 305 aa16.52■□□□□ 0.24
VARS-218ENST00000459667 WNT10AQ9GZT5 417 aa16.52■□□□□ 0.24
VARS-218ENST00000459667 RHBDL2Q9NX52 303 aa16.52■□□□□ 0.24
VARS-218ENST00000459667 SLC23A1Q9UHI7 598 aa16.52■□□□□ 0.24
VARS-218ENST00000459667 TRRAPQ9Y4A5 3859 aa16.51■□□□□ 0.23
VARS-218ENST00000459667 SCTP09683 121 aa16.51■□□□□ 0.23
VARS-218ENST00000459667 CD1BP29016 333 aa16.51■□□□□ 0.23
VARS-218ENST00000459667 TGFBR1P36897 503 aa16.51■□□□□ 0.23
VARS-218ENST00000459667 TALDO1P37837 337 aa16.51■□□□□ 0.23
VARS-218ENST00000459667 ARFRP1Q13795 201 aa16.51■□□□□ 0.23
VARS-218ENST00000459667 C9orf152Q5JTZ5 239 aa16.51■□□□□ 0.23
VARS-218ENST00000459667 ODF3L1Q8IXM7 274 aa16.51■□□□□ 0.23
VARS-218ENST00000459667 OR2T10Q8NGZ9 312 aa16.51■□□□□ 0.23
VARS-218ENST00000459667 EAF1Q96JC9 268 aaPredicted RBP16.51■□□□□ 0.23
VARS-218ENST00000459667 FGF16O43320 207 aa16.5■□□□□ 0.23
VARS-218ENST00000459667 FCGR3AP08637 254 aa16.5■□□□□ 0.23
VARS-218ENST00000459667 RPS19P39019 145 aaKnown RBP16.5■□□□□ 0.23
VARS-218ENST00000459667 NCS1P62166 190 aa16.5■□□□□ 0.23
VARS-218ENST00000459667 HIST2H2BDQ6DRA6 164 aa16.5■□□□□ 0.23
VARS-218ENST00000459667 ANKRD13BQ86YJ7 626 aa16.5■□□□□ 0.23
VARS-218ENST00000459667 C5orf56Q8N8D9 126 aa16.5■□□□□ 0.23
VARS-218ENST00000459667 IFI27L2Q9H2X8 130 aa16.5■□□□□ 0.23
VARS-218ENST00000459667 OR1A1Q9P1Q5 309 aa16.5■□□□□ 0.23
VARS-218ENST00000459667 SPATA2Q9UM82 520 aa16.5■□□□□ 0.23
VARS-218ENST00000459667 SAA2-SAA4A0A096LPE2 208 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 ZNF736B4DX44 427 aaPredicted RBP16.49■□□□□ 0.23
VARS-218ENST00000459667 TRDCB7Z8K6 153 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 ST8SIA5O15466 376 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 HSPA12AO43301 675 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 FBXO24O75426 580 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 MOSP00540 346 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 SAA2P0DJI9 122 aaPredicted RBP16.49■□□□□ 0.23
VARS-218ENST00000459667 ZBTB25P24278 435 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 ALDH3B2P48448 385 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 VBP1P61758 197 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 LSAMPQ13449 338 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 C2orf68Q2NKX9 166 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 Q8N6K4 173 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 WIPF2Q8TF74 440 aaPredicted RBP16.49■□□□□ 0.23
VARS-218ENST00000459667 PARP12Q9H0J9 701 aaKnown RBP16.49■□□□□ 0.23
VARS-218ENST00000459667 NBEAL1Q6ZS30 2694 aa16.49■□□□□ 0.23
VARS-218ENST00000459667 A0A0A6YYH2 397 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 A6NJ64 397 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 GABARAPO95166 117 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms