RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 OR51E2Q9H255 320 aa18.51■□□□□ 0.55
CBX3-204ENST00000456948 FGF16O43320 207 aa18.5■□□□□ 0.55
CBX3-204ENST00000456948 LANCL1O43813 399 aa18.5■□□□□ 0.55
CBX3-204ENST00000456948 ZBTB25P24278 435 aa18.5■□□□□ 0.55
CBX3-204ENST00000456948 PPP1CCP36873 323 aaKnown RBP18.5■□□□□ 0.55
CBX3-204ENST00000456948 C9orf152Q5JTZ5 239 aa18.5■□□□□ 0.55
CBX3-204ENST00000456948 CENPVQ7Z7K6 275 aaPredicted RBP18.5■□□□□ 0.55
CBX3-204ENST00000456948 IZUMO1Q8IYV9 350 aa18.5■□□□□ 0.55
CBX3-204ENST00000456948 EDARADDQ8WWZ3 215 aa18.5■□□□□ 0.55
CBX3-204ENST00000456948 ATG5Q9H1Y0 275 aa18.5■□□□□ 0.55
CBX3-204ENST00000456948 MMP27Q9H306 513 aa18.5■□□□□ 0.55
CBX3-204ENST00000456948 SERPINE3A8MV23 424 aa18.49■□□□□ 0.55
CBX3-204ENST00000456948 SLC31A2O15432 143 aa18.49■□□□□ 0.55
CBX3-204ENST00000456948 FBXO24O75426 580 aa18.49■□□□□ 0.55
CBX3-204ENST00000456948 CSF1P09603 554 aa18.49■□□□□ 0.55
CBX3-204ENST00000456948 TALDO1P37837 337 aa18.49■□□□□ 0.55
CBX3-204ENST00000456948 HLA-DRB3P79483 266 aa18.49■□□□□ 0.55
CBX3-204ENST00000456948 EBI3Q14213 229 aa18.49■□□□□ 0.55
CBX3-204ENST00000456948 S1PR3Q99500 378 aa18.49■□□□□ 0.55
CBX3-204ENST00000456948 Q9N2K0 584 aa18.49■□□□□ 0.55
CBX3-204ENST00000456948 PIPOXQ9P0Z9 390 aa18.49■□□□□ 0.55
CBX3-204ENST00000456948 DAPK2Q9UIK4 370 aa18.49■□□□□ 0.55
CBX3-204ENST00000456948 NCBP2LA6PVI3 153 aaKnown RBP18.48■□□□□ 0.55
CBX3-204ENST00000456948 MOSP00540 346 aa18.48■□□□□ 0.55
CBX3-204ENST00000456948 SDC2P34741 201 aa18.48■□□□□ 0.55
CBX3-204ENST00000456948 GNMTQ14749 295 aa18.48■□□□□ 0.55
CBX3-204ENST00000456948 KIR2DS1Q14954 304 aa18.48■□□□□ 0.55
CBX3-204ENST00000456948 PLAC9Q5JTB6 97 aa18.48■□□□□ 0.55
CBX3-204ENST00000456948 FAM53AQ6NSI3 398 aaPredicted RBP18.48■□□□□ 0.55
CBX3-204ENST00000456948 OR8H1Q8NGG4 311 aa18.48■□□□□ 0.55
CBX3-204ENST00000456948 PHF21AQ96BD5 680 aa18.48■□□□□ 0.55
CBX3-204ENST00000456948 TET2Q6N021 2002 aaPredicted RBP18.48■□□□□ 0.55
CBX3-204ENST00000456948 MGAM2Q2M2H8 2515 aa18.47■□□□□ 0.55
CBX3-204ENST00000456948 IGHV3-72A0A0B4J1Y9 119 aa18.47■□□□□ 0.55
CBX3-204ENST00000456948 TRDCB7Z8K6 153 aa18.47■□□□□ 0.55
CBX3-204ENST00000456948 ITGB1BP1O14713 200 aa18.47■□□□□ 0.55
CBX3-204ENST00000456948 TMEM127O75204 238 aa18.47■□□□□ 0.55
CBX3-204ENST00000456948 SLC2A2P11168 524 aaPredicted RBP18.47■□□□□ 0.55
CBX3-204ENST00000456948 CEACAM6P40199 344 aa18.47■□□□□ 0.55
CBX3-204ENST00000456948 SERPINB10P48595 397 aa18.47■□□□□ 0.55
CBX3-204ENST00000456948 ARFRP1Q13795 201 aa18.47■□□□□ 0.55
CBX3-204ENST00000456948 SFXN4Q6P4A7 337 aa18.47■□□□□ 0.55
CBX3-204ENST00000456948 EAF1Q96JC9 268 aaPredicted RBP18.47■□□□□ 0.55
CBX3-204ENST00000456948 HDHD3Q9BSH5 251 aaPredicted RBP18.47■□□□□ 0.55
CBX3-204ENST00000456948 WNT10AQ9GZT5 417 aa18.47■□□□□ 0.55
CBX3-204ENST00000456948 SLC23A1Q9UHI7 598 aa18.47■□□□□ 0.55
CBX3-204ENST00000456948 A0A075B6Q4 140 aa18.46■□□□□ 0.55
CBX3-204ENST00000456948 SMIM30A4D0T7 59 aa18.46■□□□□ 0.55
CBX3-204ENST00000456948 RAB27BO00194 218 aa18.46■□□□□ 0.55
CBX3-204ENST00000456948 RAB29O14966 203 aa18.46■□□□□ 0.55
CBX3-204ENST00000456948 HIST1H1DP16402 221 aaKnown RBP18.46■□□□□ 0.55
CBX3-204ENST00000456948 SCAND1P57086 179 aa18.46■□□□□ 0.55
CBX3-204ENST00000456948 MXD1Q05195 221 aa18.46■□□□□ 0.55
CBX3-204ENST00000456948 FAM71F2Q6NXP2 309 aa18.46■□□□□ 0.55
CBX3-204ENST00000456948 Q6ZS46 218 aa18.46■□□□□ 0.55
CBX3-204ENST00000456948 CROCCP3Q8IVE0 287 aa18.46■□□□□ 0.55
CBX3-204ENST00000456948 C11orf44Q8N8P7 122 aa18.46■□□□□ 0.55
CBX3-204ENST00000456948 GNB3P16520 340 aa18.45■□□□□ 0.54
CBX3-204ENST00000456948 NR2C2APQ86WQ0 139 aa18.45■□□□□ 0.54
CBX3-204ENST00000456948 C5orf56Q8N8D9 126 aa18.45■□□□□ 0.54
CBX3-204ENST00000456948 OR5AU1Q8NGC0 362 aa18.45■□□□□ 0.54
CBX3-204ENST00000456948 OR4A4PQ8NGN8 299 aa18.45■□□□□ 0.54
CBX3-204ENST00000456948 A0A0B4J203 849 aa18.44■□□□□ 0.54
CBX3-204ENST00000456948 RRP9O43818 475 aaKnown RBP18.44■□□□□ 0.54
CBX3-204ENST00000456948 AIREO43918 545 aa18.44■□□□□ 0.54
CBX3-204ENST00000456948 AMY1AP04745 511 aa18.44■□□□□ 0.54
CBX3-204ENST00000456948 AMY2AP04746 511 aa18.44■□□□□ 0.54
CBX3-204ENST00000456948 PLA2G7Q13093 441 aa18.44■□□□□ 0.54
CBX3-204ENST00000456948 MOGAT2Q3SYC2 334 aa18.44■□□□□ 0.54
CBX3-204ENST00000456948 FOXRED2Q8IWF2 684 aa18.44■□□□□ 0.54
CBX3-204ENST00000456948 OR4X2Q8NGF9 303 aa18.44■□□□□ 0.54
CBX3-204ENST00000456948 CYYR1Q96J86 154 aa18.44■□□□□ 0.54
CBX3-204ENST00000456948 RASL11BQ9BPW5 248 aa18.44■□□□□ 0.54
CBX3-204ENST00000456948 ETV7Q9Y603 341 aa18.44■□□□□ 0.54
CBX3-204ENST00000456948 MFNGO00587 321 aa18.43■□□□□ 0.54
CBX3-204ENST00000456948 SCTP09683 121 aa18.43■□□□□ 0.54
CBX3-204ENST00000456948 PITPNAQ00169 270 aa18.43■□□□□ 0.54
CBX3-204ENST00000456948 IDNKQ5T6J7 187 aa18.43■□□□□ 0.54
CBX3-204ENST00000456948 ZNF833PQ6ZTB9 187 aa18.43■□□□□ 0.54
CBX3-204ENST00000456948 C5orf24Q7Z6I8 188 aa18.43■□□□□ 0.54
CBX3-204ENST00000456948 NDUFA11Q86Y39 141 aa18.43■□□□□ 0.54
CBX3-204ENST00000456948 ZNF221Q9UK13 617 aa18.43■□□□□ 0.54
CBX3-204ENST00000456948 KCNK7Q9Y2U2 307 aa18.43■□□□□ 0.54
CBX3-204ENST00000456948 WNK1Q9H4A3 2382 aa18.43■□□□□ 0.54
CBX3-204ENST00000456948 FABP7O15540 132 aa18.42■□□□□ 0.54
CBX3-204ENST00000456948 DIRAS3O95661 229 aa18.42■□□□□ 0.54
CBX3-204ENST00000456948 OPN1MWP04001 364 aa18.42■□□□□ 0.54
CBX3-204ENST00000456948 OPN1MW2P0DN77 364 aa18.42■□□□□ 0.54
CBX3-204ENST00000456948 OPN1MW3P0DN78 364 aa18.42■□□□□ 0.54
CBX3-204ENST00000456948 LSAMPQ13449 338 aa18.42■□□□□ 0.54
CBX3-204ENST00000456948 SRSF7Q16629 238 aaKnown RBP eCLIP18.42■□□□□ 0.54
CBX3-204ENST00000456948 TMEM95Q3KNT9 176 aa18.42■□□□□ 0.54
CBX3-204ENST00000456948 OR10J5Q8NHC4 309 aa18.42■□□□□ 0.54
CBX3-204ENST00000456948 GON7Q9BXV9 100 aa18.42■□□□□ 0.54
CBX3-204ENST00000456948 LIN7CQ9NUP9 197 aaKnown RBP18.42■□□□□ 0.54
CBX3-204ENST00000456948 TRRAPQ9Y4A5 3859 aa18.42■□□□□ 0.54
CBX3-204ENST00000456948 PKD1L1Q8TDX9 2849 aa18.42■□□□□ 0.54
CBX3-204ENST00000456948 SAA2-SAA4A0A096LPE2 208 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 ST8SIA5O15466 376 aa18.41■□□□□ 0.54
CBX3-204ENST00000456948 KCNAB3O43448 404 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms