RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 FAM213BQ8TBF2 198 aa15.52■□□□□ 0.07
SEMA3B-209ENST00000456560 HES4Q9HCC6 221 aa15.52■□□□□ 0.07
SEMA3B-209ENST00000456560 TRAPPC2LQ9UL33 140 aa15.52■□□□□ 0.07
SEMA3B-209ENST00000456560 SPTBN2O15020 2390 aa15.52■□□□□ 0.07
SEMA3B-209ENST00000456560 A0A1B0GW64 132 aa15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 TM4SF5O14894 197 aa15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 CST7O76096 145 aa15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 COX5AP20674 150 aa15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 ZNF295-AS1Q8N0V1 137 aa15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 LINC00469Q8N7U9 141 aa15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 KLF14Q8TD94 323 aaPredicted RBP15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 LSM10Q969L4 123 aaKnown RBP15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 NXPH3O95157 252 aa15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 IGKV3-15P01624 115 aa15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 PPP1CCP36873 323 aaKnown RBP15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 Q6ZRM9 215 aa15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 C11orf53Q8IXP5 236 aa15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 C9orf106Q8NAJ2 232 aa15.51■□□□□ 0.07
SEMA3B-209ENST00000456560 C1QTNF9BB2RNN3 333 aa15.5■□□□□ 0.07
SEMA3B-209ENST00000456560 WRBO00258 174 aa15.5■□□□□ 0.07
SEMA3B-209ENST00000456560 IFNA17P01571 189 aa15.5■□□□□ 0.07
SEMA3B-209ENST00000456560 GRPP07492 148 aa15.5■□□□□ 0.07
SEMA3B-209ENST00000456560 EPHA1P21709 976 aa15.5■□□□□ 0.07
SEMA3B-209ENST00000456560 CNEP1R1Q8N9A8 125 aa15.5■□□□□ 0.07
SEMA3B-209ENST00000456560 LFNGQ8NES3 379 aa15.5■□□□□ 0.07
SEMA3B-209ENST00000456560 PUS1Q9Y606 427 aaKnown RBP eCLIP15.5■□□□□ 0.07
SEMA3B-209ENST00000456560 TRAV17A0A0B4J275 112 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 IGHV3-64DA0A0J9YX35 117 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 HSPA12AO43301 675 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 AGFG2O95081 481 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 OR2C1O95371 312 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 NCMAPQ5T1S8 102 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 VWA1Q6PCB0 445 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 C1orf162Q8NEQ5 155 aaPredicted RBP15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 OR8G5Q8NG78 346 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 ABHD14AQ9BUJ0 271 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 TMPRSS5Q9H3S3 457 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 TINAGQ9UJW2 476 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 PPP1R3CQ9UQK1 317 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 MLNRO43193 412 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 HAND1O96004 215 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 CEACAM1P13688 526 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 ZNF585BQ52M93 769 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 SOHLH1Q5JUK2 328 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 SP5Q6BEB4 398 aaPredicted RBP15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 PRR18Q8N4B5 295 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 UBALD1Q8TB05 177 aa15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 GNPNAT1Q96EK6 184 aaPredicted RBP15.49■□□□□ 0.07
SEMA3B-209ENST00000456560 IGKV1-5P01602 117 aa15.48■□□□□ 0.07
SEMA3B-209ENST00000456560 RPS23P62266 143 aaKnown RBP15.48■□□□□ 0.07
SEMA3B-209ENST00000456560 IZUMO4Q1ZYL8 232 aa15.48■□□□□ 0.07
SEMA3B-209ENST00000456560 SPSB3Q6PJ21 355 aa15.48■□□□□ 0.07
SEMA3B-209ENST00000456560 TMEM217Q8N7C4 229 aa15.48■□□□□ 0.07
SEMA3B-209ENST00000456560 RAB40CQ96S21 281 aa15.48■□□□□ 0.07
SEMA3B-209ENST00000456560 ATP5SQ99766 215 aa15.48■□□□□ 0.07
SEMA3B-209ENST00000456560 RARRES2Q99969 163 aa15.48■□□□□ 0.07
SEMA3B-209ENST00000456560 OBP2BQ9NPH6 170 aa15.48■□□□□ 0.07
SEMA3B-209ENST00000456560 PSPNO60542 156 aa15.48■□□□□ 0.07
SEMA3B-209ENST00000456560 IGHV2-70P01814 119 aa15.48■□□□□ 0.07
SEMA3B-209ENST00000456560 CEACAM6P40199 344 aa15.48■□□□□ 0.07
SEMA3B-209ENST00000456560 PPIHO43447 177 aaKnown RBP15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 GFRA3O60609 400 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 CEBPDP49716 269 aaPredicted RBP15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 RPL23AP62750 156 aaKnown RBP15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 CCL20P78556 96 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 C1QL4Q86Z23 238 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 EDARADDQ8WWZ3 215 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 SARAFQ96BY9 339 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 TRBV23-1A0A0A0MS06 115 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 GPR37O15354 613 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 MAS1LP35410 378 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 CD200P41217 278 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 FOXF2Q12947 444 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 FIP1L1Q6UN15 594 aaKnown RBP15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 HEPN1Q6WQI6 88 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 ZNF826PQ6ZT77 177 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 DRAM1Q8N682 238 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 SNIP1Q8TAD8 396 aaKnown RBP15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 CXXC4Q9H2H0 198 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 PLSCR4Q9NRQ2 329 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 CACNG5Q9UF02 275 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 OR14J1Q9UGF5 321 aa15.47■□□□□ 0.07
SEMA3B-209ENST00000456560 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.46■□□□□ 0.07
SEMA3B-209ENST00000456560 TMEM30CPA0ZSE6 113 aa15.46■□□□□ 0.07
SEMA3B-209ENST00000456560 WNT9BO14905 357 aa15.46■□□□□ 0.07
SEMA3B-209ENST00000456560 TUBG1P23258 451 aa15.46■□□□□ 0.07
SEMA3B-209ENST00000456560 RPS10P46783 165 aaKnown RBP15.46■□□□□ 0.07
SEMA3B-209ENST00000456560 KIAA0141Q14154 515 aaPredicted RBP15.46■□□□□ 0.07
SEMA3B-209ENST00000456560 SMDT1Q9H4I9 107 aa15.46■□□□□ 0.07
SEMA3B-209ENST00000456560 TUBG2Q9NRH3 451 aa15.46■□□□□ 0.07
SEMA3B-209ENST00000456560 LIN7CQ9NUP9 197 aaKnown RBP15.46■□□□□ 0.07
SEMA3B-209ENST00000456560 KCNS2Q9ULS6 477 aa15.46■□□□□ 0.07
SEMA3B-209ENST00000456560 RBM7Q9Y580 266 aaKnown RBP15.46■□□□□ 0.07
SEMA3B-209ENST00000456560 WSB1Q9Y6I7 421 aa15.46■□□□□ 0.07
SEMA3B-209ENST00000456560 KITLGP21583 273 aa15.45■□□□□ 0.06
SEMA3B-209ENST00000456560 HOXC12P31275 282 aa15.45■□□□□ 0.06
SEMA3B-209ENST00000456560 RAB2AP61019 212 aa15.45■□□□□ 0.06
SEMA3B-209ENST00000456560 RUNX1Q01196 453 aa15.45■□□□□ 0.06
SEMA3B-209ENST00000456560 STX12Q86Y82 276 aa15.45■□□□□ 0.06
SEMA3B-209ENST00000456560 RNASE11Q8TAA1 199 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms