RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 A8MZ25 164 aa9.15□□□□□ -0.94
LMCD1-206ENST00000456506 GPX5O75715 221 aa9.15□□□□□ -0.94
LMCD1-206ENST00000456506 LALBAP00709 142 aa9.15□□□□□ -0.94
LMCD1-206ENST00000456506 RAB40BQ12829 278 aa9.15□□□□□ -0.94
LMCD1-206ENST00000456506 C5orf64Q2M2E5 130 aa9.15□□□□□ -0.94
LMCD1-206ENST00000456506 ATAD3CQ5T2N8 411 aa9.15□□□□□ -0.94
LMCD1-206ENST00000456506 ZFAND6Q6FIF0 208 aa9.15□□□□□ -0.94
LMCD1-206ENST00000456506 SIGIRRQ6IA17 410 aa9.15□□□□□ -0.94
LMCD1-206ENST00000456506 ZNF833PQ6ZTB9 187 aa9.15□□□□□ -0.94
LMCD1-206ENST00000456506 OR4K15Q8NH41 348 aa9.15□□□□□ -0.94
LMCD1-206ENST00000456506 GPR148Q8TDV2 347 aa9.15□□□□□ -0.94
LMCD1-206ENST00000456506 MRPL20Q9BYC9 149 aaKnown RBP9.15□□□□□ -0.94
LMCD1-206ENST00000456506 FRAS1Q86XX4 4008 aa9.15□□□□□ -0.94
LMCD1-206ENST00000456506 TRBV5-5A0A0J9YX44 114 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 NBR2O15453 112 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 OGG1O15527 345 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 MRPS14O60783 128 aaKnown RBP9.14□□□□□ -0.95
LMCD1-206ENST00000456506 ZNF780AO75290 641 aaPredicted RBP9.14□□□□□ -0.95
LMCD1-206ENST00000456506 SAP30O75446 220 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 FADS2O95864 444 aaKnown RBP9.14□□□□□ -0.95
LMCD1-206ENST00000456506 CSTBP04080 98 aaKnown RBP9.14□□□□□ -0.95
LMCD1-206ENST00000456506 LGALS1P09382 135 aaKnown RBP9.14□□□□□ -0.95
LMCD1-206ENST00000456506 GTF2F2P13984 249 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 CRHBPP24387 322 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 BDKRB2P30411 391 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 GBX2P52951 348 aaPredicted RBP9.14□□□□□ -0.95
LMCD1-206ENST00000456506 RPS11P62280 158 aaKnown RBP eCLIP9.14□□□□□ -0.95
LMCD1-206ENST00000456506 CCDC58Q4VC31 144 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 LY6G6FQ5SQ64 297 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 RPL22L1Q6P5R6 122 aaKnown RBP9.14□□□□□ -0.95
LMCD1-206ENST00000456506 TMEM65Q6PI78 240 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 OR13C5Q8NGS8 318 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 CASTOR1Q8WTX7 329 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 ARPC1AQ92747 370 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 MRPL48Q96GC5 212 aaKnown RBP9.14□□□□□ -0.95
LMCD1-206ENST00000456506 Q96MT0 163 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 ZNF251Q9BRH9 671 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 DUSP21Q9H596 190 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 ZMAT4Q9H898 229 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 FGF20Q9NP95 211 aaPredicted RBP9.14□□□□□ -0.95
LMCD1-206ENST00000456506 PARP11Q9NR21 331 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 FKBP14Q9NWM8 211 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 GNG12Q9UBI6 72 aa9.14□□□□□ -0.95
LMCD1-206ENST00000456506 TNCP24821 2201 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 TRAV8-7A0A075B6U6 113 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 SNTNA6NMZ2 147 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 LINC01619G3V211 115 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 SPINT2O43291 252 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 CD2P06729 351 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 IGHV4-30-4P0DP06 118 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 SNRPBP14678 240 aaKnown RBP9.13□□□□□ -0.95
LMCD1-206ENST00000456506 OR3A3P47888 321 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 VEGFCP49767 419 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 ETV1P50549 477 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 GABARAPL2P60520 117 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 SLC22A6Q4U2R8 563 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 C6orf183Q5T699 404 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 RAB12Q6IQ22 244 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 ADAMTSL5Q6ZMM2 481 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 OR52L2PQ8NGH6 319 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 OR6Q1Q8NGQ2 317 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 MYCBPQ99417 103 aaPredicted RBP9.13□□□□□ -0.95
LMCD1-206ENST00000456506 ABHD14AQ9BUJ0 271 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 TAF9BQ9HBM6 251 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 SPACA1Q9HBV2 294 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 PAK1IP1Q9NWT1 392 aaPredicted RBP9.13□□□□□ -0.95
LMCD1-206ENST00000456506 ETAA1Q9NY74 926 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 TRAPPC2LQ9UL33 140 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 NUBP2Q9Y5Y2 271 aa9.13□□□□□ -0.95
LMCD1-206ENST00000456506 SAA2-SAA4A0A096LPE2 208 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 MCRIP1C9JLW8 97 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 FCN1O00602 326 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 LDLRAD4O15165 306 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 IGLV1-51P01701 117 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 OR8U9P0C7N5 309 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 SAA2P0DJI9 122 aaPredicted RBP9.12□□□□□ -0.95
LMCD1-206ENST00000456506 PPP1CCP36873 323 aaKnown RBP9.12□□□□□ -0.95
LMCD1-206ENST00000456506 HTD2P86397 168 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 SMN1Q16637 294 aaKnown RBP9.12□□□□□ -0.95
LMCD1-206ENST00000456506 OR2G6Q5TZ20 316 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 LIN54Q6MZP7 749 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 TRAT1Q6PIZ9 186 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 CD200R1LQ6Q8B3 271 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 ZNF554Q86TJ5 538 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 HAPLN4Q86UW8 402 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 PRR18Q8N4B5 295 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 STX19Q8N4C7 294 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 MRPL30Q8TCC3 161 aaKnown RBP9.12□□□□□ -0.95
LMCD1-206ENST00000456506 NEK7Q8TDX7 302 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 SMIM19Q96E16 107 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 MRPS24Q96EL2 167 aaKnown RBP9.12□□□□□ -0.95
LMCD1-206ENST00000456506 PGLYRP3Q96LB9 341 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 THAP7Q9BT49 309 aaPredicted RBP9.12□□□□□ -0.95
LMCD1-206ENST00000456506 IFI27L2Q9H2X8 130 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 PALMDQ9NP74 551 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 OR2S2Q9NQN1 319 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 CNOT2Q9NZN8 540 aaKnown RBP9.12□□□□□ -0.95
LMCD1-206ENST00000456506 PSORS1C1Q9UIG5 152 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 JPT1Q9UK76 154 aa9.12□□□□□ -0.95
LMCD1-206ENST00000456506 BLOC1S6Q9UL45 172 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms