RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 FABP7O15540 132 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 TXNL1O43396 289 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 HPGDSO60760 199 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 MMP23AO75900 390 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 EIF4EP06730 217 aaKnown RBP7.07□□□□□ -1.28
COL28A1-205ENST00000453441 ELK1P19419 428 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 OMGP23515 440 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 S100A5P33763 92 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 PRSS3P35030 304 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 RAB7AP51149 207 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 DYNLT3P51808 116 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 HILS1P60008 231 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 KLRD1Q13241 179 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 MADCAM1Q13477 382 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 PRR18Q8N4B5 295 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 OR4P4Q8NGL7 312 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 OR10X1Q8NGY0 326 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 OR1L1Q8NH94 360 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 RNF141Q8WVD5 230 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 SSMEM1Q8WWF3 244 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 SLC6A7Q99884 636 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 HDHD3Q9BSH5 251 aaPredicted RBP7.07□□□□□ -1.28
COL28A1-205ENST00000453441 CABLES2Q9BTV7 478 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 TOLLIPQ9H0E2 274 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 MEGF9Q9H1U4 602 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 EXTL2Q9UBQ6 330 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 PSG11Q9UQ72 335 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 ZFHX3Q15911 3703 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 SVEP1Q4LDE5 3571 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 IGHV3OR16-10A0A075B7F0 116 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 A0A0U1RQK1 487 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 DPPA5A6NC42 116 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.06□□□□□ -1.28
COL28A1-205ENST00000453441 BUB1B-PAK6H3BSN5 160 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 TRIM77I1YAP6 450 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 HSPA12AO43301 675 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 VAMP1P23763 118 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 BRS3P32247 399 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 GDNFP39905 211 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 ZNF137PP52743 207 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 RPL15P61313 204 aaKnown RBP7.06□□□□□ -1.28
COL28A1-205ENST00000453441 SSBP1Q04837 148 aaKnown RBP7.06□□□□□ -1.28
COL28A1-205ENST00000453441 LTC4SQ16873 150 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 DEFB112Q30KQ8 113 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 MORN2Q502X0 79 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 RUSC1-AS1Q66K80 236 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 OLFML2AQ68BL7 652 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 PYHIN1Q6K0P9 492 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 FAM71F2Q6NXP2 309 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 CNIH2Q6PI25 160 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 Q6YL49 198 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 SLC25A48Q6ZT89 311 aaKnown RBP7.06□□□□□ -1.28
COL28A1-205ENST00000453441 HOGA1Q86XE5 327 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 PDZD9Q8IXQ8 264 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 OR8H3Q8N146 312 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 DTX3Q8N9I9 347 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 OR2AK2Q8NG84 335 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 OR10J5Q8NHC4 309 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 NUDCD2Q8WVJ2 157 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 C6orf62Q9GZU0 229 aaPredicted RBP7.06□□□□□ -1.28
COL28A1-205ENST00000453441 IFT46Q9NQC8 304 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 ABCB10Q9NRK6 738 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 ZNRD1Q9P1U0 126 aa7.06□□□□□ -1.28
COL28A1-205ENST00000453441 NF1P21359 2839 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 TRBV6-7A0A0A0MS04 114 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 CTDSPLO15194 276 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 SSX5O60225 188 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 HLA-DQB1P01920 261 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 SCTP09683 121 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 PTBP1P26599 531 aaKnown RBP eCLIP7.05□□□□□ -1.28
COL28A1-205ENST00000453441 TAS2R46P59540 309 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 ACTBP60709 375 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 ACTG1P63261 375 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 ZNF816Q0VGE8 651 aaPredicted RBP7.05□□□□□ -1.28
COL28A1-205ENST00000453441 BAMBIQ13145 260 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 LRRC75BQ2VPJ9 315 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 TPTE2P1Q5T6R2 138 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 Q6ZPA2 131 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 LINC00299Q6ZSB3 139 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 BCL6BQ8N143 479 aaPredicted RBP7.05□□□□□ -1.28
COL28A1-205ENST00000453441 SIGLECL1Q8N7X8 197 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 ZNF439Q8NDP4 499 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 BEST4Q8NFU0 473 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 GPX8Q8TED1 209 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 IL1F10Q8WWZ1 152 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 RPEQ96AT9 228 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 DIRAS2Q96HU8 199 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 DCUN1D5Q9BTE7 237 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 ABHD14AQ9BUJ0 271 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 ST6GALNAC5Q9BVH7 336 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 RAB18Q9NP72 206 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 PIPOXQ9P0Z9 390 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 SLC23A1Q9UHI7 598 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 ZNF107Q9UII5 783 aaPredicted RBP7.05□□□□□ -1.28
COL28A1-205ENST00000453441 ANXA10Q9UJ72 324 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 PITPNC1Q9UKF7 332 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 ANAPC10Q9UM13 185 aa7.05□□□□□ -1.28
COL28A1-205ENST00000453441 IGHV3-43A0A0B4J1X8 118 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 A0A1W2PRD5 423 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 A0A1W2PRF3 423 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms