RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 SSX9Q7RTT3 188 aa13.35□□□□□ -0.27
TRA2B-205ENST00000453386 PPP1R32Q7Z5V6 425 aa13.35□□□□□ -0.27
TRA2B-205ENST00000453386 OR4X1Q8NH49 305 aa13.35□□□□□ -0.27
TRA2B-205ENST00000453386 MEGF10Q96KG7 1140 aa13.35□□□□□ -0.27
TRA2B-205ENST00000453386 WDR61Q9GZS3 305 aaKnown RBP13.35□□□□□ -0.27
TRA2B-205ENST00000453386 PKIAP61925 76 aa13.35□□□□□ -0.27
TRA2B-205ENST00000453386 TESK1Q15569 626 aa13.35□□□□□ -0.27
TRA2B-205ENST00000453386 CTDSP1Q9GZU7 261 aa13.35□□□□□ -0.27
TRA2B-205ENST00000453386 TRAPPC2LQ9UL33 140 aa13.35□□□□□ -0.27
TRA2B-205ENST00000453386 SIRPB1O00241 398 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 IGLV2-14P01704 120 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 CA6P23280 308 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 DDTP30046 118 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 IL2RGP31785 369 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 GNG3P63215 75 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 PLP2Q04941 152 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 C16orf82Q7Z2V1 217 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 TAF15Q92804 592 aaKnown RBP eCLIP13.34□□□□□ -0.273e-6■□□□□ 8.6
TRA2B-205ENST00000453386 PINX1Q96BK5 328 aaKnown RBP13.34□□□□□ -0.27
TRA2B-205ENST00000453386 PRSS50Q9UI38 385 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 LAMP3Q9UQV4 416 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 DMDP11532 3685 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 DIDO1Q9BTC0 2240 aaKnown RBP13.34□□□□□ -0.27
TRA2B-205ENST00000453386 A0A087X0M5 115 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 A0A1B0GX30 115 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 CLDN1O95832 211 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 CELA3AP09093 270 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 SLC38A11Q08AI6 406 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 TMEM241Q24JQ0 296 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 ZNF585BQ52M93 769 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 UNQ6494/PRO21346Q6UXR6 183 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 LINC00596Q86U02 117 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 NAT8Q9UHE5 227 aa13.34□□□□□ -0.27
TRA2B-205ENST00000453386 TRBV6-6A0A0A6YYG2 114 aa13.33□□□□□ -0.28
TRA2B-205ENST00000453386 PHOX2AO14813 284 aa13.33□□□□□ -0.28
TRA2B-205ENST00000453386 CHD3Q12873 2000 aaKnown RBP13.33□□□□□ -0.28
TRA2B-205ENST00000453386 SPATA46Q5T0L3 261 aa13.33□□□□□ -0.28
TRA2B-205ENST00000453386 GPR87Q9BY21 358 aa13.33□□□□□ -0.28
TRA2B-205ENST00000453386 TMEM9BQ9NQ34 198 aa13.33□□□□□ -0.28
TRA2B-205ENST00000453386 IGHV3-64DA0A0J9YX35 117 aa13.33□□□□□ -0.28
TRA2B-205ENST00000453386 A0A1B0GV90 55 aa13.33□□□□□ -0.28
TRA2B-205ENST00000453386 CD81P60033 236 aa13.33□□□□□ -0.28
TRA2B-205ENST00000453386 ERVS71-1P61550 626 aa13.33□□□□□ -0.28
TRA2B-205ENST00000453386 MEF2BQ02080 365 aaPredicted RBP13.33□□□□□ -0.28
TRA2B-205ENST00000453386 RPP25LQ8N5L8 163 aaKnown RBP13.33□□□□□ -0.28
TRA2B-205ENST00000453386 LIN7CQ9NUP9 197 aaKnown RBP13.33□□□□□ -0.28
TRA2B-205ENST00000453386 PILRBQ9UKJ0 227 aa13.33□□□□□ -0.28
TRA2B-205ENST00000453386 SIT1Q9Y3P8 196 aa13.33□□□□□ -0.28
TRA2B-205ENST00000453386 URB1O60287 2271 aaKnown RBP13.33□□□□□ -0.28
TRA2B-205ENST00000453386 FRYQ5TBA9 3013 aa13.33□□□□□ -0.28
TRA2B-205ENST00000453386 LRP5LA4QPB2 252 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 TDHQ8IZJ6 230 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 POM121L2Q96KW2 1035 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 LINC00470Q9BZP3 86 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 SLC25A22Q9H936 323 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 CDH20Q9HBT6 801 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 IGKV3D-15A0A087WSY6 115 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 A0A1W2PR80 420 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 SYNGR4O95473 234 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 IGKV1D-33P01593 117 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 IGKV1-33P01594 117 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 CEACAM6P40199 344 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 COL10A1Q03692 680 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 BSXQ3C1V8 233 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 FGFRL1Q8N441 504 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 BOKQ9UMX3 212 aaPredicted RBP13.32□□□□□ -0.28
TRA2B-205ENST00000453386 PATE3B3GLJ2 98 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.32□□□□□ -0.28
TRA2B-205ENST00000453386 TMEM183AQ8IXX5 376 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 OR5B12Q96R08 314 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 SMOC1Q9H4F8 434 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 SRD5A3Q9H8P0 318 aa13.32□□□□□ -0.28
TRA2B-205ENST00000453386 FAM166BA8MTA8 275 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 H7BYZ3 331 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 NTN3O00634 580 aaPredicted RBP13.31□□□□□ -0.28
TRA2B-205ENST00000453386 COX5BP10606 129 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 PSMB3P49720 205 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 TRA2AQ13595 282 aaKnown RBP eCLIP13.31□□□□□ -0.283e-10■■■■■ 35.2
TRA2B-205ENST00000453386 REC114Q7Z4M0 266 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 APH1AQ96BI3 265 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 MPC1Q9Y5U8 109 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 KIAA2026Q5HYC2 2103 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 OR5B21A6NL26 309 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 RNF224P0DH78 156 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 APLNRP35414 380 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 ARR3P36575 388 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 RPS16P62249 146 aaKnown RBP13.31□□□□□ -0.28
TRA2B-205ENST00000453386 RTP5Q14D33 572 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 ZNF66Q6ZN08 573 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 VASH2Q86V25 355 aa13.31□□□□□ -0.28
TRA2B-205ENST00000453386 MRPS18CQ9Y3D5 142 aaKnown RBP13.31□□□□□ -0.28
TRA2B-205ENST00000453386 ESPL1Q14674 2120 aa13.3□□□□□ -0.28
TRA2B-205ENST00000453386 AHCTF1Q8WYP5 2266 aa13.3□□□□□ -0.28
TRA2B-205ENST00000453386 PPP5D1E7EU14 171 aa13.3□□□□□ -0.28
TRA2B-205ENST00000453386 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.3□□□□□ -0.28
TRA2B-205ENST00000453386 KRASP01116 189 aa13.3□□□□□ -0.28
TRA2B-205ENST00000453386 IGHEP01854 428 aa13.3□□□□□ -0.28
TRA2B-205ENST00000453386 PFN1P07737 140 aaKnown RBP13.3□□□□□ -0.28
TRA2B-205ENST00000453386 GALR1P47211 349 aa13.3□□□□□ -0.28
TRA2B-205ENST00000453386 CYP2G1PQ6ZSU1 146 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms