RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 ZFP57Q9NU63 452 aa15.29■□□□□ 0.04
USP40-207ENST00000450940 FOXI3A8MTJ6 420 aaPredicted RBP15.28■□□□□ 0.04
USP40-207ENST00000450940 AP4M1O00189 453 aa15.28■□□□□ 0.04
USP40-207ENST00000450940 RGS11O94810 467 aa15.28■□□□□ 0.04
USP40-207ENST00000450940 ARSBP15848 533 aa15.28■□□□□ 0.04
USP40-207ENST00000450940 SLC6A1P30531 599 aa15.28■□□□□ 0.04
USP40-207ENST00000450940 RPL23AP62750 156 aaKnown RBP15.28■□□□□ 0.04
USP40-207ENST00000450940 SLC35B1P78383 322 aa15.28■□□□□ 0.04
USP40-207ENST00000450940 FABP5Q01469 135 aa15.28■□□□□ 0.04
USP40-207ENST00000450940 LSAMPQ13449 338 aa15.28■□□□□ 0.04
USP40-207ENST00000450940 TBCEQ15813 527 aaPredicted RBP15.28■□□□□ 0.04
USP40-207ENST00000450940 PHF21AQ96BD5 680 aa15.28■□□□□ 0.04
USP40-207ENST00000450940 URM1Q9BTM9 101 aaKnown RBP15.28■□□□□ 0.04
USP40-207ENST00000450940 RIMS4Q9H426 269 aaPredicted RBP15.28■□□□□ 0.04
USP40-207ENST00000450940 ACOT13Q9NPJ3 140 aa15.28■□□□□ 0.04
USP40-207ENST00000450940 LINC00527Q9UJ94 153 aa15.28■□□□□ 0.04
USP40-207ENST00000450940 HSF4Q9ULV5 492 aa15.28■□□□□ 0.04
USP40-207ENST00000450940 AK6Q9Y3D8 172 aaKnown RBP15.28■□□□□ 0.04
USP40-207ENST00000450940 PF4P02776 101 aa15.27■□□□□ 0.04
USP40-207ENST00000450940 F2RL1P55085 397 aa15.27■□□□□ 0.04
USP40-207ENST00000450940 P2RY14Q15391 338 aa15.27■□□□□ 0.04
USP40-207ENST00000450940 ZNF833PQ6ZTB9 187 aa15.27■□□□□ 0.04
USP40-207ENST00000450940 MOB1BQ7L9L4 216 aa15.27■□□□□ 0.04
USP40-207ENST00000450940 PLGRKTQ9HBL7 147 aa15.27■□□□□ 0.04
USP40-207ENST00000450940 NECAP2Q9NVZ3 263 aa15.27■□□□□ 0.04
USP40-207ENST00000450940 PLEKHJ1Q9NW61 149 aa15.27■□□□□ 0.04
USP40-207ENST00000450940 ABRACLQ9P1F3 81 aa15.27■□□□□ 0.04
USP40-207ENST00000450940 ZNF580Q9UK33 172 aa15.27■□□□□ 0.04
USP40-207ENST00000450940 RAB26Q9ULW5 256 aa15.27■□□□□ 0.04
USP40-207ENST00000450940 SOCS1O15524 211 aa15.26■□□□□ 0.03
USP40-207ENST00000450940 IGLL1P15814 213 aa15.26■□□□□ 0.03
USP40-207ENST00000450940 PSMD7P51665 324 aa15.26■□□□□ 0.03
USP40-207ENST00000450940 TMEM50BP56557 158 aa15.26■□□□□ 0.03
USP40-207ENST00000450940 RAB11BQ15907 218 aa15.26■□□□□ 0.03
USP40-207ENST00000450940 KHDC1LQ5JSQ8 128 aa15.26■□□□□ 0.03
USP40-207ENST00000450940 ETV3LQ6ZN32 361 aa15.26■□□□□ 0.03
USP40-207ENST00000450940 RCC1LQ96I51 464 aaKnown RBP15.26■□□□□ 0.03
USP40-207ENST00000450940 CNBD2Q96M20 576 aa15.26■□□□□ 0.03
USP40-207ENST00000450940 RASL11BQ9BPW5 248 aa15.26■□□□□ 0.03
USP40-207ENST00000450940 NABP2Q9BQ15 211 aa15.26■□□□□ 0.03
USP40-207ENST00000450940 BLOC1S6Q9UL45 172 aa15.26■□□□□ 0.03
USP40-207ENST00000450940 ITGB1BP1O14713 200 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 LDLRAD4O15165 306 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 PRB2P02812 416 aaPredicted RBP15.25■□□□□ 0.03
USP40-207ENST00000450940 CALRP27797 417 aaKnown RBP15.25■□□□□ 0.03
USP40-207ENST00000450940 RANBP1P43487 201 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 SSX1Q16384 188 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 PNLIPRP3Q17RR3 467 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 FOXB2Q5VYV0 432 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 FAM71F2Q6NXP2 309 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 CD200R1LQ6Q8B3 271 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 ZNF367Q7RTV3 350 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 LINC00482Q8N8I6 264 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 RNF152Q8N8N0 203 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 OR51D1Q8NGF3 324 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 RBMXL1Q96E39 390 aaKnown RBP15.25■□□□□ 0.03
USP40-207ENST00000450940 GON7Q9BXV9 100 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 IFI27L2Q9H2X8 130 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 AK3Q9UIJ7 227 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 V9GY05 133 aa15.25■□□□□ 0.03
USP40-207ENST00000450940 DUS4LO95620 317 aaKnown RBP15.24■□□□□ 0.03
USP40-207ENST00000450940 IGF1P05019 195 aa15.24■□□□□ 0.03
USP40-207ENST00000450940 SOX6P35712 828 aa15.24■□□□□ 0.03
USP40-207ENST00000450940 THBS3P49746 956 aa15.24■□□□□ 0.03
USP40-207ENST00000450940 CFHR3Q02985 330 aa15.24■□□□□ 0.03
USP40-207ENST00000450940 C2orf76Q3KRA6 126 aa15.24■□□□□ 0.03
USP40-207ENST00000450940 TEX38Q6PEX7 206 aa15.24■□□□□ 0.03
USP40-207ENST00000450940 OR2AK2Q8NG84 335 aa15.24■□□□□ 0.03
USP40-207ENST00000450940 FAM3DQ96BQ1 224 aa15.24■□□□□ 0.03
USP40-207ENST00000450940 HSPB9Q9BQS6 159 aa15.24■□□□□ 0.03
USP40-207ENST00000450940 ZNF251Q9BRH9 671 aa15.24■□□□□ 0.03
USP40-207ENST00000450940 MRPL20Q9BYC9 149 aaKnown RBP15.24■□□□□ 0.03
USP40-207ENST00000450940 CHMP1AQ9HD42 196 aaPredicted RBP15.24■□□□□ 0.03
USP40-207ENST00000450940 STEAP1Q9UHE8 339 aa15.24■□□□□ 0.03
USP40-207ENST00000450940 MGAT4AQ9UM21 535 aa15.24■□□□□ 0.03
USP40-207ENST00000450940 SAA2-SAA4A0A096LPE2 208 aa15.23■□□□□ 0.03
USP40-207ENST00000450940 TRAV1-2A0A0B4J238 106 aa15.23■□□□□ 0.03
USP40-207ENST00000450940 ERICH4A6NGS2 130 aa15.23■□□□□ 0.03
USP40-207ENST00000450940 MRPS14O60783 128 aaKnown RBP15.23■□□□□ 0.03
USP40-207ENST00000450940 SAA2P0DJI9 122 aaPredicted RBP15.23■□□□□ 0.03
USP40-207ENST00000450940 OR3A3P47888 321 aa15.23■□□□□ 0.03
USP40-207ENST00000450940 MRPL41Q8IXM3 137 aaKnown RBP15.23■□□□□ 0.03
USP40-207ENST00000450940 IL1F10Q8WWZ1 152 aa15.23■□□□□ 0.03
USP40-207ENST00000450940 CHCHD6Q9BRQ6 235 aa15.23■□□□□ 0.03
USP40-207ENST00000450940 AGMATQ9BSE5 352 aa15.23■□□□□ 0.03
USP40-207ENST00000450940 GHITMQ9H3K2 345 aa15.23■□□□□ 0.03
USP40-207ENST00000450940 AURKAIP1Q9NWT8 199 aaPredicted RBP15.23■□□□□ 0.03
USP40-207ENST00000450940 PIPOXQ9P0Z9 390 aa15.23■□□□□ 0.03
USP40-207ENST00000450940 SLC23A1Q9UHI7 598 aa15.23■□□□□ 0.03
USP40-207ENST00000450940 MYCNOSP40205 109 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 VEGFCP49767 419 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 CLDN12P56749 244 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 GABARAPL2P60520 117 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 ACTBP60709 375 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 FOXE3Q13461 319 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 C18orf65Q6ZTR6 163 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 NPBQ8NG41 125 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 OR56B1Q8NGI3 324 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 RITA1Q96K30 269 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 P2RX4Q99571 388 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms