RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 LINC00527Q9UJ94 153 aa12.3□□□□□ -0.44
LIMS1-210ENST00000449684 ADARB2-AS1A8MUL3 147 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 SOCS1O15524 211 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 DENRO43583 198 aaKnown RBP12.29□□□□□ -0.44
LIMS1-210ENST00000449684 LANCL1O43813 399 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 IGHG2P01859 326 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 CD37P11049 281 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 ZNF137PP52743 207 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 GABARAPL2P60520 117 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 HES5Q5TA89 166 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 C5orf24Q7Z6I8 188 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 OR56B1Q8NGI3 324 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 GFI1Q99684 422 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 LIN7CQ9NUP9 197 aaKnown RBP12.29□□□□□ -0.44
LIMS1-210ENST00000449684 AK3Q9UIJ7 227 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 MGAT4AQ9UM21 535 aa12.29□□□□□ -0.44
LIMS1-210ENST00000449684 PLXNB1O43157 2135 aa12.28□□□□□ -0.44
LIMS1-210ENST00000449684 A0A0A6YYD4 124 aa12.28□□□□□ -0.44
LIMS1-210ENST00000449684 ZNF736B4DX44 427 aaPredicted RBP12.28□□□□□ -0.44
LIMS1-210ENST00000449684 AP4M1O00189 453 aa12.28□□□□□ -0.44
LIMS1-210ENST00000449684 HSPA12AO43301 675 aa12.28□□□□□ -0.44
LIMS1-210ENST00000449684 RRP9O43818 475 aaKnown RBP12.28□□□□□ -0.44
LIMS1-210ENST00000449684 MRPS14O60783 128 aaKnown RBP12.28□□□□□ -0.44
LIMS1-210ENST00000449684 HMGN3Q15651 99 aa12.28□□□□□ -0.44
LIMS1-210ENST00000449684 C2orf76Q3KRA6 126 aa12.28□□□□□ -0.44
LIMS1-210ENST00000449684 TCTEX1D4Q5JR98 221 aa12.28□□□□□ -0.44
LIMS1-210ENST00000449684 Q8N6K4 173 aa12.28□□□□□ -0.44
LIMS1-210ENST00000449684 S1PR3Q99500 378 aa12.28□□□□□ -0.44
LIMS1-210ENST00000449684 GON7Q9BXV9 100 aa12.28□□□□□ -0.44
LIMS1-210ENST00000449684 ABCG5Q9H222 651 aa12.28□□□□□ -0.44
LIMS1-210ENST00000449684 NUDT19A8MXV4 375 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 NAPSAO96009 420 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 GPR12P47775 334 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 LSAMPQ13449 338 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 SSX1Q16384 188 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 OXLD1Q5BKU9 147 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 LY6G6FQ5SQ64 297 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 SAMD5Q5TGI4 173 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 STPG2Q8N412 459 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 FAM89BQ8N5H3 189 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 COMMD1Q8N668 190 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 Q8N9W7 124 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 ARHGAP5-AS1Q96IT6 56 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 CMSS1Q9BQ75 279 aaKnown RBP12.27□□□□□ -0.45
LIMS1-210ENST00000449684 ZNF251Q9BRH9 671 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 C12orf4Q9NQ89 552 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 NDUFB11Q9NX14 153 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 PIPOXQ9P0Z9 390 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 SLC23A1Q9UHI7 598 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 RAB22AQ9UL26 194 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 HSF4Q9ULV5 492 aa12.27□□□□□ -0.45
LIMS1-210ENST00000449684 TRAV1-2A0A0B4J238 106 aa12.26□□□□□ -0.45
LIMS1-210ENST00000449684 RAB3BP20337 219 aa12.26□□□□□ -0.45
LIMS1-210ENST00000449684 ZBTB25P24278 435 aa12.26□□□□□ -0.45
LIMS1-210ENST00000449684 PSMB9P28065 219 aa12.26□□□□□ -0.45
LIMS1-210ENST00000449684 SOX6P35712 828 aa12.26□□□□□ -0.45
LIMS1-210ENST00000449684 MMDQ15546 238 aa12.26□□□□□ -0.45
LIMS1-210ENST00000449684 BEAN1Q3B7T3 259 aa12.26□□□□□ -0.45
LIMS1-210ENST00000449684 ZNF880Q6PDB4 577 aa12.26□□□□□ -0.45
LIMS1-210ENST00000449684 EDARADDQ8WWZ3 215 aa12.26□□□□□ -0.45
LIMS1-210ENST00000449684 HDHD3Q9BSH5 251 aaPredicted RBP12.26□□□□□ -0.45
LIMS1-210ENST00000449684 PECRQ9BY49 303 aa12.26□□□□□ -0.45
LIMS1-210ENST00000449684 MRPL20Q9BYC9 149 aaKnown RBP12.26□□□□□ -0.45
LIMS1-210ENST00000449684 ZFP57Q9NU63 452 aa12.26□□□□□ -0.45
LIMS1-210ENST00000449684 NOTCH3Q9UM47 2321 aa12.26□□□□□ -0.45
LIMS1-210ENST00000449684 SAA2-SAA4A0A096LPE2 208 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 TMEM272A0A1B0GTI8 110 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 TRDV1A0A1B0GX56 115 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 RAB29O14966 203 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 ST8SIA5O15466 376 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 CD3GP09693 182 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 SAA2P0DJI9 122 aaPredicted RBP12.25□□□□□ -0.45
LIMS1-210ENST00000449684 VDAC1P21796 283 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 GADD45AP24522 165 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 CEACAM6P40199 344 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 OR3A3P47888 321 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 F2RL1P55085 397 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 HLA-DRB3P79483 266 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 PNLIPRP3Q17RR3 467 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 C22orf42Q6IC83 251 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 TEX38Q6PEX7 206 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 PHF21AQ96BD5 680 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 YTHDF1Q9BYJ9 559 aaKnown RBP12.25□□□□□ -0.45
LIMS1-210ENST00000449684 PLSCR3Q9NRY6 295 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 KIAA1456Q9P272 454 aa12.25□□□□□ -0.45
LIMS1-210ENST00000449684 TRBV6-6A0A0A6YYG2 114 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 METTL21EPA6NDL7 271 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 LINC01548A6NM66 108 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 IFITM5A6NNB3 132 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 SLC2A2P11168 524 aaPredicted RBP12.24□□□□□ -0.45
LIMS1-210ENST00000449684 TMEM50BP56557 158 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 OR10A3P58181 314 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 ACTBP60709 375 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 RPL23AP62750 156 aaKnown RBP12.24□□□□□ -0.45
LIMS1-210ENST00000449684 CXorf66Q5JRM2 361 aaPredicted RBP12.24□□□□□ -0.45
LIMS1-210ENST00000449684 ZNF833PQ6ZTB9 187 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 REC114Q7Z4M0 266 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 ODF3L1Q8IXM7 274 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 SPARTQ8N0X7 666 aa12.24□□□□□ -0.45
LIMS1-210ENST00000449684 KLHL30-AS1Q8NEE0 82 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms