RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 VEGFCP49767 419 aa11.14□□□□□ -0.63
RTFDC1-204ENST00000449062 HES5Q5TA89 166 aa11.14□□□□□ -0.63
RTFDC1-204ENST00000449062 C22orf42Q6IC83 251 aa11.14□□□□□ -0.63
RTFDC1-204ENST00000449062 ZNF773Q6PK81 442 aa11.14□□□□□ -0.63
RTFDC1-204ENST00000449062 NDUFA11Q86Y39 141 aa11.14□□□□□ -0.63
RTFDC1-204ENST00000449062 ZNF251Q9BRH9 671 aa11.14□□□□□ -0.63
RTFDC1-204ENST00000449062 AGMATQ9BSE5 352 aa11.14□□□□□ -0.63
RTFDC1-204ENST00000449062 PECRQ9BY49 303 aa11.14□□□□□ -0.63
RTFDC1-204ENST00000449062 RAB22AQ9UL26 194 aa11.14□□□□□ -0.63
RTFDC1-204ENST00000449062 RRP15Q9Y3B9 282 aaKnown RBP11.14□□□□□ -0.63
RTFDC1-204ENST00000449062 RAB27BO00194 218 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 PDCD5O14737 125 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 IGHG2P01859 326 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 OPN1MWP04001 364 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 OPN1MW2P0DN77 364 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 OPN1MW3P0DN78 364 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 IL3RAP26951 378 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 HES1Q14469 280 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 MOGAT2Q3SYC2 334 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 CENPVQ7Z7K6 275 aaPredicted RBP11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 TGIF2LXQ8IUE1 241 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 Q8N9W7 124 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 OR56B1Q8NGI3 324 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 OR2T10Q8NGZ9 312 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 FCGR1BQ92637 280 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 PARP12Q9H0J9 701 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 Q9N2K0 584 aa11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 TXNL4BQ9NX01 149 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-204ENST00000449062 A0A0B4J203 849 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 IGKV1-6A0A0C4DH72 117 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 ITGB1BP1O14713 200 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 TXNL1O43396 289 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 PROP1O75360 226 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 MOSP00540 346 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 RAB3BP20337 219 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 RANBP1P43487 201 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 OR3A3P47888 321 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 F2RL1P55085 397 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 ZNF833PQ6ZTB9 187 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 MOB1BQ7L9L4 216 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 PTX4Q96A99 478 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 RITA1Q96K30 269 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 ABHD14AQ9BUJ0 271 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 IFI27L2Q9H2X8 130 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 PLXNB1O43157 2135 aa11.12□□□□□ -0.63
RTFDC1-204ENST00000449062 PEX14O75381 377 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 RGS11O94810 467 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 SCTP09683 121 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 SLC2A2P11168 524 aaPredicted RBP11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 RAB6AP20340 208 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 PSMB9P28065 219 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 DEFA6Q01524 100 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 LSAMPQ13449 338 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 NSUN5P1Q3KNT7 163 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 KCTD21Q4G0X4 260 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 ARSJQ5FYB0 599 aaPredicted RBP11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 C9orf152Q5JTZ5 239 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 FAM71E2Q8N5Q1 922 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 WFDC9Q8NEX5 89 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 OR8H1Q8NGG4 311 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 NOL4LQ96MY1 436 aaPredicted RBP11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 S1PR3Q99500 378 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 NABP2Q9BQ15 211 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 TOLLIPQ9H0E2 274 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 ABCG5Q9H222 651 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 ABRACLQ9P1F3 81 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 STUB1Q9UNE7 303 aa11.11□□□□□ -0.63
RTFDC1-204ENST00000449062 MYL9P24844 172 aa11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 TPRA1Q86W33 373 aa11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 OR10R2Q8NGX6 335 aa11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 IL1F10Q8WWZ1 152 aa11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 RAB3CQ96E17 227 aa11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 CMSS1Q9BQ75 279 aaKnown RBP11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 MRPL20Q9BYC9 149 aaKnown RBP11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 C11orf54Q9H0W9 315 aaPredicted RBP11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 OR51E2Q9H255 320 aa11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 CHMP1AQ9HD42 196 aaPredicted RBP11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 C12orf4Q9NQ89 552 aa11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 LIN7CQ9NUP9 197 aaKnown RBP11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 SLC23A1Q9UHI7 598 aa11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 MGAT4AQ9UM21 535 aa11.1□□□□□ -0.63
RTFDC1-204ENST00000449062 DNAH3Q8TD57 4116 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 SAA2-SAA4A0A096LPE2 208 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 NCBP2LA6PVI3 153 aaKnown RBP11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 NOTOA8MTQ0 251 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 TRDCB7Z8K6 153 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 MFNGO00587 321 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 ST8SIA5O15466 376 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 SAA2P0DJI9 122 aaPredicted RBP11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 CT45A6P0DMU7 189 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 CT45A5P0DMU8 189 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 CT45A7P0DMV0 189 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 CEACAM6P40199 344 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 GPR12P47775 334 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 HLA-DRB3P79483 266 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 KPRPQ5T749 579 aaPredicted RBP11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 ZNF329Q86UD4 541 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 OR2AK2Q8NG84 335 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 R3HDM4Q96D70 268 aa11.09□□□□□ -0.63
RTFDC1-204ENST00000449062 OR1A1Q9P1Q5 309 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms