RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 DTX3Q8N9I9 347 aa9.56□□□□□ -0.88
RFC4-208ENST00000447345 OR2AK2Q8NG84 335 aa9.56□□□□□ -0.88
RFC4-208ENST00000447345 LINC01006Q8NI28 216 aa9.56□□□□□ -0.88
RFC4-208ENST00000447345 SLC25A46Q96AG3 418 aa9.56□□□□□ -0.88
RFC4-208ENST00000447345 RBMXL1Q96E39 390 aaKnown RBP9.56□□□□□ -0.88
RFC4-208ENST00000447345 SLC25A33Q9BSK2 321 aa9.56□□□□□ -0.88
RFC4-208ENST00000447345 NPFFR1Q9GZQ6 430 aa9.56□□□□□ -0.88
RFC4-208ENST00000447345 MGAT4AQ9UM21 535 aa9.56□□□□□ -0.88
RFC4-208ENST00000447345 TRAV18A0A075B6X5 111 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 IGHV1-3A0A0C4DH29 117 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 IGKV1-6A0A0C4DH72 117 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 CLPSL1A2RUU4 121 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 TRDCB7Z8K6 153 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 BET1O15155 118 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 YPEL1O60688 119 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 SCGNO76038 276 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 RGS11O94810 467 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 IGKV1D-33P01593 117 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 IGKV1-33P01594 117 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 GAPDHP04406 335 aaKnown RBP9.55□□□□□ -0.88
RFC4-208ENST00000447345 SCAND1P57086 179 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 GNG2P59768 71 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 SRSF4Q08170 494 aaKnown RBP9.55□□□□□ -0.88
RFC4-208ENST00000447345 ZNF816Q0VGE8 651 aaPredicted RBP9.55□□□□□ -0.88
RFC4-208ENST00000447345 HABP2Q14520 560 aaPredicted RBP9.55□□□□□ -0.88
RFC4-208ENST00000447345 HNF4GQ14541 408 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 HERPUD1Q15011 391 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 CTF1Q16619 201 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 Q3ZCU0 254 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 ARSJQ5FYB0 599 aaPredicted RBP9.55□□□□□ -0.88
RFC4-208ENST00000447345 UBE2NLQ5JXB2 153 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 STEAP3Q658P3 488 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 TGIF2LXQ8IUE1 241 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 CLVS1Q8IUQ0 354 aaPredicted RBP9.55□□□□□ -0.88
RFC4-208ENST00000447345 OR8H3Q8N146 312 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 SAMD12Q8N8I0 201 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 RTN4IP1Q8WWV3 396 aaPredicted RBP9.55□□□□□ -0.88
RFC4-208ENST00000447345 CFHR4Q92496 578 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 YPEL2Q96QA6 119 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 DCSTAMPQ9H295 470 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 SPATA2Q9UM82 520 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 RNF114Q9Y508 228 aa9.55□□□□□ -0.88
RFC4-208ENST00000447345 IGKV1D-8A0A087WSZ0 117 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 SAA2-SAA4A0A096LPE2 208 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 SH2D7A6NKC9 451 aaPredicted RBP9.54□□□□□ -0.88
RFC4-208ENST00000447345 FABP7O15540 132 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 LPLP06858 475 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 GSTP1P09211 210 aaKnown RBP9.54□□□□□ -0.88
RFC4-208ENST00000447345 GSTT2P0CG29 244 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 GSTT2BP0CG30 244 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 SAA2P0DJI9 122 aaPredicted RBP9.54□□□□□ -0.88
RFC4-208ENST00000447345 PTHLHP12272 177 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 ZBTB25P24278 435 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 CEACAM6P40199 344 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 KIR2DS4P43632 304 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 OR3A3P47888 321 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 KIR2DS1Q14954 304 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 ARL6IP1Q15041 203 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 TMEM95Q3KNT9 176 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 ZNF260Q3ZCT1 412 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 IGSF11Q5DX21 431 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 HACD4Q5VWC8 232 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 OR2T6Q8NHC8 308 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 WFDC12Q8WWY7 111 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 ST6GALNAC6Q969X2 333 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 ABHD14BQ96IU4 210 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 IFI27L2Q9H2X8 130 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.54□□□□□ -0.88
RFC4-208ENST00000447345 COMMD3Q9UBI1 195 aa9.54□□□□□ -0.88
RFC4-208ENST00000447345 TET2Q6N021 2002 aaPredicted RBP9.54□□□□□ -0.88
RFC4-208ENST00000447345 ZNF736B4DX44 427 aaPredicted RBP9.53□□□□□ -0.88
RFC4-208ENST00000447345 SSX5O60225 188 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 TSPAN9O75954 239 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 FCER2P06734 321 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 FAM106CPP0CH98 169 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 TMEM11P17152 192 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 ZNF137PP52743 207 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 Q6ZS46 218 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 ODF3L1Q8IXM7 274 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 OR4A4PQ8NGN8 299 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 RBM14Q96PK6 669 aaKnown RBP9.53□□□□□ -0.88
RFC4-208ENST00000447345 ST6GALNAC5Q9BVH7 336 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 MRPL20Q9BYC9 149 aaKnown RBP9.53□□□□□ -0.88
RFC4-208ENST00000447345 C16orf95Q9H693 158 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 RANBP3Q9H6Z4 567 aaPredicted RBP9.53□□□□□ -0.88
RFC4-208ENST00000447345 ZNF702PQ9H963 129 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 DIABLOQ9NR28 239 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 RDH8Q9NYR8 311 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 MMP24Q9Y5R2 645 aa9.53□□□□□ -0.88
RFC4-208ENST00000447345 A0A1B0GUS0 222 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 MEIS3P1A6NDR6 274 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 FAM90A9PA6NNJ1 464 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 POM121CA8CG34 1229 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 TXNL1O43396 289 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 TMEM127O75204 238 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 OR2F2O95006 317 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 EIF4EP06730 217 aaKnown RBP9.52□□□□□ -0.89
RFC4-208ENST00000447345 VSIG10L2P0DP72 767 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 DTYMKP23919 212 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 RORCP51449 518 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms