RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 IKZF2Q9UKS7 526 aa10.16□□□□□ -0.78
SYNCRIP-203ENST00000444272 IGKV1-9A0A0C4DH69 117 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 SLC22A1O15245 554 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 GGCTO75223 188 aaKnown RBP10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 ZNF254O75437 659 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 TUSC2O75896 110 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 GSTP1P09211 210 aaKnown RBP10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 CCL1P22362 96 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 PLEKHG7Q6ZR37 379 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 OR2T33Q8NG76 320 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 ASB9Q96DX5 294 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 NICN1Q9BSH3 213 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 ADGRL4Q9HBW9 690 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 AKIP1Q9NQ31 210 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 CMC2Q9NRP2 79 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 BAIAP2Q9UQB8 552 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 DMRT1Q9Y5R6 373 aa10.15□□□□□ -0.78
SYNCRIP-203ENST00000444272 A8MWP6 167 aa10.14□□□□□ -0.79
SYNCRIP-203ENST00000444272 APELAP0DMC3 54 aa10.14□□□□□ -0.79
SYNCRIP-203ENST00000444272 ZNF20P17024 532 aa10.14□□□□□ -0.79
SYNCRIP-203ENST00000444272 KCNJ3P48549 501 aa10.14□□□□□ -0.79
SYNCRIP-203ENST00000444272 RHOGP84095 191 aa10.14□□□□□ -0.79
SYNCRIP-203ENST00000444272 ADAD2Q8NCV1 583 aaKnown RBP10.14□□□□□ -0.79
SYNCRIP-203ENST00000444272 C7orf34Q96L11 122 aa10.14□□□□□ -0.79
SYNCRIP-203ENST00000444272 YTHDF1Q9BYJ9 559 aaKnown RBP10.14□□□□□ -0.79
SYNCRIP-203ENST00000444272 NEK6Q9HC98 313 aa10.14□□□□□ -0.79
SYNCRIP-203ENST00000444272 ARMC1Q9NVT9 282 aa10.14□□□□□ -0.79
SYNCRIP-203ENST00000444272 SYT7O43581 403 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 ORC5O43913 435 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 T-ENOLP0DO92 83 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 HAMPP81172 84 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 SSBP2P81877 361 aaPredicted RBP10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 ROM1Q03395 351 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 ATP5G2Q06055 141 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 MED21Q13503 144 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 ICAM4Q14773 271 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 PSG5Q15238 335 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 ZNF833PQ6ZTB9 187 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 GPHB5Q86YW7 130 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 FAM46BQ96A09 425 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 CNN2Q99439 309 aaKnown RBP10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 RHOFQ9HBH0 211 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 ING4Q9UNL4 249 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 R4GMQ9 66 aa10.13□□□□□ -0.79
SYNCRIP-203ENST00000444272 TMEM30CPA0ZSE6 113 aa10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 FAM90A23PA8MXZ1 464 aa10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 F8W735 103 aaPredicted RBP10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 RGS16O15492 202 aaPredicted RBP10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 SOX14O95416 240 aa10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 MIFP14174 115 aa10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 SMIM11AP58511 58 aa10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 ZNF585BQ52M93 769 aa10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 STEAP3Q658P3 488 aa10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 RASSF6Q6ZTQ3 369 aa10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 PRR18Q8N4B5 295 aa10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 SETD9Q8NE22 299 aa10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 MRPS24Q96EL2 167 aaKnown RBP10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 TMEM68Q96MH6 324 aa10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 ABHD14AQ9BUJ0 271 aa10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 RCC2Q9P258 522 aaKnown RBP10.12□□□□□ -0.79
SYNCRIP-203ENST00000444272 FAM223BA6NKX1 122 aa10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 H7C2Y5 167 aa10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 TSPAN4O14817 238 aa10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 GSTA4O15217 222 aa10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 FADS2O95864 444 aaKnown RBP10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 PRH1P02810 166 aa10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 PRKACBP22694 351 aa10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 FAM3BP58499 235 aaPredicted RBP10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 GLDNQ6ZMI3 551 aaPredicted RBP10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 FAM223AQ8IWN6 122 aa10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 C15orf53Q8NAA6 179 aa10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 OR9Q2Q8NGE9 314 aa10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 OPALINQ96PE5 141 aa10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 DPCDQ9BVM2 203 aaPredicted RBP10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 TMED3Q9Y3Q3 217 aa10.11□□□□□ -0.79
SYNCRIP-203ENST00000444272 SAA2-SAA4A0A096LPE2 208 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 MAGEB4O15481 346 aaPredicted RBP10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 MRPL3P09001 348 aaKnown RBP10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 SAA2P0DJI9 122 aaPredicted RBP10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 ATF1P18846 271 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 BTF3P20290 206 aaKnown RBP10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 ASIPP42127 132 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 RIPK1Q13546 671 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 MICAQ29983 383 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 OR4A47Q6IF82 309 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 SUMF2Q8NBJ7 301 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 OR1L1Q8NH94 360 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 PP6455Q8WZ26 134 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 FAM162AQ96A26 154 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 APOL4Q9BPW4 351 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 BTBD10Q9BSF8 475 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 C5orf66Q9H5L9 145 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 ZNF581Q9P0T4 197 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 SNX5Q9Y5X3 404 aa10.1□□□□□ -0.79
SYNCRIP-203ENST00000444272 OR4C46A6NHA9 309 aa10.09□□□□□ -0.79
SYNCRIP-203ENST00000444272 SPINT2O43291 252 aa10.09□□□□□ -0.79
SYNCRIP-203ENST00000444272 SULT1B1O43704 296 aa10.09□□□□□ -0.79
SYNCRIP-203ENST00000444272 NPY1RP25929 384 aa10.09□□□□□ -0.79
SYNCRIP-203ENST00000444272 MAGEA2P43356 314 aa10.09□□□□□ -0.79
SYNCRIP-203ENST00000444272 KRTAP10-1P60331 282 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms