RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CMTM3Q96MX0 182 aa8.73□□□□□ -1.01
HDAC6-211ENST00000443563 ABHD14AQ9BUJ0 271 aa8.73□□□□□ -1.01
HDAC6-211ENST00000443563 ABCG5Q9H222 651 aa8.73□□□□□ -1.01
HDAC6-211ENST00000443563 A0A1W2PPE3 182 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 A6NDX4 124 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 ITGB1BP1O14713 200 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 FAM106CPP0CH98 169 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 SOX6P35712 828 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 PPP1CCP36873 323 aaKnown RBP8.72□□□□□ -1.01
HDAC6-211ENST00000443563 RAB13P51153 203 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 ZNF137PP52743 207 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 TMBIM6P55061 237 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 GNG2P59768 71 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 ZNF260Q3ZCT1 412 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 AWAT1Q58HT5 328 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 CT45A1Q5HYN5 189 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 UTF1Q5T230 341 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 Q6ZS49 121 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 THNSL2Q86YJ6 484 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 CLVS1Q8IUQ0 354 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-211ENST00000443563 CT45A3Q8NHU0 189 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 SLC25A38Q96DW6 304 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 CYYR1Q96J86 154 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 NPFFR1Q9GZQ6 430 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 DCSTAMPQ9H295 470 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 RANBP3Q9H6Z4 567 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-211ENST00000443563 SLC23A1Q9UHI7 598 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 MMP24Q9Y5R2 645 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 DNHD1Q96M86 4753 aa8.72□□□□□ -1.01
HDAC6-211ENST00000443563 TRAV18A0A075B6X5 111 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 IGHV1-3A0A0C4DH29 117 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 SMIM31A0A1B0GVY4 71 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 TMEM235A6NFC5 223 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 FABP7O15540 132 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 XRCC3O43542 346 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 TSPAN9O75954 239 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 SCTP09683 121 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 ZNF182P17025 639 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-211ENST00000443563 CEACAM6P40199 344 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 ZNF134P52741 427 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 GNMTQ14749 295 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 FAM71F2Q6NXP2 309 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 Q6ZPA2 131 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 TGIF2LXQ8IUE1 241 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 LYG1Q8N1E2 194 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 C3orf56Q8N813 242 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 SAMD12Q8N8I0 201 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 OR4C13Q8NGP0 309 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 OR10J5Q8NHC4 309 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 RTN4IP1Q8WWV3 396 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-211ENST00000443563 ST6GALNAC6Q969X2 333 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 S1PR3Q99500 378 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 NAA50Q9GZZ1 169 aaKnown RBP8.71□□□□□ -1.02
HDAC6-211ENST00000443563 C16orf95Q9H693 158 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 PIPOXQ9P0Z9 390 aa8.71□□□□□ -1.02
HDAC6-211ENST00000443563 STAB1Q9NY15 2570 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 A0A1W2PPI3 338 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 CLPSL1A2RUU4 121 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 FAM90A9PA6NNJ1 464 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 M0QZK8 103 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 TIMM23O14925 209 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 RAB29O14966 203 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 BET1O15155 118 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 SLC31A2O15432 143 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 LANCL1O43813 399 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 APOA1P02647 267 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 CTXN2P0C2S0 81 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 CD1BP29016 333 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 CBX5P45973 191 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 HABP2Q14520 560 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-211ENST00000443563 TMEM69Q5SWH9 247 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 FAM53AQ6NSI3 398 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-211ENST00000443563 C11orf88Q6PI97 169 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 Q6ZSV7 163 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 MOB3BQ86TA1 216 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 CFHR4Q92496 578 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 RBM14Q96PK6 669 aaKnown RBP8.7□□□□□ -1.02
HDAC6-211ENST00000443563 CABLES2Q9BTV7 478 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 COMMD3Q9UBI1 195 aa8.7□□□□□ -1.02
HDAC6-211ENST00000443563 ZNF230Q9UIE0 474 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-211ENST00000443563 TRBV6-7A0A0A0MS04 114 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 OR2F2O95006 317 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 SNRNP70P08621 437 aaKnown RBP8.69□□□□□ -1.02
HDAC6-211ENST00000443563 GSTT2P0CG29 244 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 GSTT2BP0CG30 244 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 MDKP21741 143 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-211ENST00000443563 REG1BP48304 166 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 RELBQ01201 579 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 HES1Q14469 280 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 CCBE1Q6UXH8 406 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-211ENST00000443563 C5orf24Q7Z6I8 188 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 TMEM219Q86XT9 240 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 IZUMO1Q8IYV9 350 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 DRAM1Q8N682 238 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 OR56B4Q8NH76 319 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 OR2T6Q8NHC8 308 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 NUDCD2Q8WVJ2 157 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 GINS4Q9BRT9 223 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 SLC25A33Q9BSK2 321 aa8.69□□□□□ -1.02
HDAC6-211ENST00000443563 ST6GALNAC5Q9BVH7 336 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms