RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 LINC01006Q8NI28 216 aa10.27□□□□□ -0.77
PDLIM2-212ENST00000443561 RTN4IP1Q8WWV3 396 aaPredicted RBP10.27□□□□□ -0.77
PDLIM2-212ENST00000443561 GALMQ96C23 342 aa10.27□□□□□ -0.77
PDLIM2-212ENST00000443561 TOLLIPQ9H0E2 274 aa10.27□□□□□ -0.77
PDLIM2-212ENST00000443561 RIMS4Q9H426 269 aaPredicted RBP10.27□□□□□ -0.77
PDLIM2-212ENST00000443561 IGHV3-72A0A0B4J1Y9 119 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 IGHV1-3A0A0C4DH29 117 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 OOSP1A8MZH6 123 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 TRDCB7Z8K6 153 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 SNRNP70P08621 437 aaKnown RBP10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 RPL5P46777 297 aaKnown RBP10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 OR3A3P47888 321 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 RPL15P61313 204 aaKnown RBP10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 SRSF4Q08170 494 aaKnown RBP10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 MADCAM1Q13477 382 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 Q8N6K4 173 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 IL1F10Q8WWZ1 152 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 ABHD14AQ9BUJ0 271 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 MIXL1Q9H2W2 232 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 C16orf95Q9H693 158 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 AUNIPQ9H7T9 357 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 KCNIP1Q9NZI2 227 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 SLC23A1Q9UHI7 598 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 AMMECR1Q9Y4X0 333 aaPredicted RBP10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 MMP24Q9Y5R2 645 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 CEPT1Q9Y6K0 416 aa10.26□□□□□ -0.77
PDLIM2-212ENST00000443561 TRAV18A0A075B6X5 111 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 SAA2-SAA4A0A096LPE2 208 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 SH2D7A6NKC9 451 aaPredicted RBP10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 POM121CA8CG34 1229 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 FABP7O15540 132 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 TMEM127O75204 238 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 GSTP1P09211 210 aaKnown RBP10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 SAA2P0DJI9 122 aaPredicted RBP10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 DTYMKP23919 212 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 RANBP1P43487 201 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 PROK1P58294 105 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 LINC00205P59089 165 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 EBI3Q14213 229 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 RPL39P5Q59GN2 51 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 UBE2NLQ5JXB2 153 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 HIST2H2BDQ6DRA6 164 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 DHRS7BQ6IAN0 325 aaPredicted RBP10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 ZNF833PQ6ZTB9 187 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 CROCCP3Q8IVE0 287 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 Q8N2B8 174 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 GVQW1Q8N7I0 195 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 SAMD12Q8N8I0 201 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 OR10X1Q8NGY0 326 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 DYNC2LI1Q8TCX1 351 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 RPEQ96AT9 228 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 KCTD12Q96CX2 325 aaKnown RBP10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 MRPL20Q9BYC9 149 aaKnown RBP10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 C11orf54Q9H0W9 315 aaPredicted RBP10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 ANAPC10Q9UM13 185 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 CMYA5Q8N3K9 4069 aa10.25□□□□□ -0.77
PDLIM2-212ENST00000443561 TRBV6-7A0A0A0MS04 114 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 BTBD17A6NE02 478 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 H3BMQ9 156 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 LANCL1O43813 399 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 HPGDSO60760 199 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 HLA-DQB1P01920 261 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 ELK1P19419 428 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 CEACAM3P40198 252 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 RAB7AP51149 207 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 TAS2R20P59543 309 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 BLCAPP62952 87 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 FOXL1Q12952 345 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 ARFRP1Q13795 201 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 SRSF7Q16629 238 aaKnown RBP eCLIP10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 PNLIPRP3Q17RR3 467 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 TMEM95Q3KNT9 176 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 STEAP3Q658P3 488 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 OR8H3Q8N146 312 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 LYG1Q8N1E2 194 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 OR4A4PQ8NGN8 299 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 WIPF2Q8TF74 440 aaPredicted RBP10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 WFDC12Q8WWY7 111 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 SNAPC3Q92966 411 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 ISOC1Q96CN7 298 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 ABHD14BQ96IU4 210 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 NABP2Q9BQ15 211 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 SERTAD4Q9NUC0 356 aa10.24□□□□□ -0.77
PDLIM2-212ENST00000443561 A0A0A6YYH2 397 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 A6NJ64 397 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 ITGB1BP1O14713 200 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 XRCC3O43542 346 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 OR2F2O95006 317 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 TMBIM6P55061 237 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 LSAMPQ13449 338 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 LIAT1Q6ZQX7 453 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 THNSL2Q86YJ6 484 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 H1FOOQ8IZA3 346 aaPredicted RBP10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 CREB3L1Q96BA8 519 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 RITA1Q96K30 269 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 RBM14Q96PK6 669 aaKnown RBP10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 SLC25A33Q9BSK2 321 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 RAB9BQ9NP90 201 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 ABCB10Q9NRK6 738 aa10.23□□□□□ -0.77
PDLIM2-212ENST00000443561 RDH8Q9NYR8 311 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms