RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ARFRP1Q13795 201 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 CTF1Q16619 201 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 PNLIPRP3Q17RR3 467 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 ZNF260Q3ZCT1 412 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 CDNFQ49AH0 187 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 HACD4Q5VWC8 232 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 FAM53AQ6NSI3 398 aaPredicted RBP12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 OR4A4PQ8NGN8 299 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 IL1F10Q8WWZ1 152 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 AKR1E2Q96JD6 320 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 ABHD14AQ9BUJ0 271 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 ZNF747Q9BV97 191 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 ABCG5Q9H222 651 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 GHITMQ9H3K2 345 aa12.07□□□□□ -0.48
CSNK1E-210ENST00000442216 STAB1Q9NY15 2570 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 A0A075B6Q4 140 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 IGHV1-3A0A0C4DH29 117 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 SLC31A2O15432 143 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 FAM106CPP0CH98 169 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 ZBTB25P24278 435 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 PPP1CCP36873 323 aaKnown RBP12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 TALDO1P37837 337 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 DIAPH2-AS1Q14236 149 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 GNMTQ14749 295 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 GPR107Q5VW38 600 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 C5orf24Q7Z6I8 188 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 OR2AK2Q8NG84 335 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 OR4C13Q8NGP0 309 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 LINC01006Q8NI28 216 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 RTN4IP1Q8WWV3 396 aaPredicted RBP12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 EDARADDQ8WWZ3 215 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 CFHR4Q92496 578 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 TAF15Q92804 592 aaKnown RBP eCLIP12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 CMTM3Q96MX0 182 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 TOLLIPQ9H0E2 274 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 DCSTAMPQ9H295 470 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 DIABLOQ9NR28 239 aa12.06□□□□□ -0.48
CSNK1E-210ENST00000442216 TIMM23O14925 209 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 LANCL1O43813 399 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 OR2F2O95006 317 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 SCTP09683 121 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 RPL5P46777 297 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 EBI3Q14213 229 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 UBE2NLQ5JXB2 153 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 FAM71F2Q6NXP2 309 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 C11orf88Q6PI97 169 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 TMEM219Q86XT9 240 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 DRAM1Q8N682 238 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 ACOT12Q8WYK0 555 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 S100A16Q96FQ6 103 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 RBM14Q96PK6 669 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 BCL7BQ9BQE9 202 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 CABLES2Q9BTV7 478 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 NAA50Q9GZZ1 169 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 PIPOXQ9P0Z9 390 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 SLC23A1Q9UHI7 598 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 RNF114Q9Y508 228 aa12.05□□□□□ -0.48
CSNK1E-210ENST00000442216 M0QZK8 103 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 FABP7O15540 132 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 HSPA12AO43301 675 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 CD1BP29016 333 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 CEACAM6P40199 344 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 RORCP51449 518 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 GNG2P59768 71 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 SHISA2Q6UWI4 295 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 TGIF2LXQ8IUE1 241 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 ODF3L1Q8IXM7 274 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 IZUMO1Q8IYV9 350 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 LYG1Q8N1E2 194 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 Q8N2B8 174 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 OR56B4Q8NH76 319 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 CAPSLQ8WWF8 208 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 SLC25A33Q9BSK2 321 aa12.04□□□□□ -0.48
CSNK1E-210ENST00000442216 IGKV1-6A0A0C4DH72 117 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 TMEM235A6NFC5 223 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 XRCC3O43542 346 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 SNRNP70P08621 437 aaKnown RBP12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 CD24P25063 80 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 PROK1P58294 105 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 HERPUD1Q15011 391 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 ZNF833PQ6ZTB9 187 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 MOB3BQ86TA1 216 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 OR2T6Q8NHC8 308 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 RAB2BQ8WUD1 216 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 AGMATQ9BSE5 352 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 PRSS22Q9GZN4 317 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 IFI27L2Q9H2X8 130 aa12.03□□□□□ -0.48
CSNK1E-210ENST00000442216 TRAV18A0A075B6X5 111 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 TRBV6-7A0A0A0MS04 114 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 RAB29O14966 203 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 CTXN2P0C2S0 81 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 GSTT2P0CG29 244 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 GSTT2BP0CG30 244 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 REG1BP48304 166 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 TMBIM6P55061 237 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 SAMD12Q8N8I0 201 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 OR10J5Q8NHC4 309 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 WFDC12Q8WWY7 111 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 AP3S1Q92572 193 aa12.02□□□□□ -0.49
CSNK1E-210ENST00000442216 S1PR3Q99500 378 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms