RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 PRDM13Q9H4Q3 707 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 COL6A3P12111 3177 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 TRAV39A0A0B4J263 110 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 ZFP92A6NM28 416 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 B4DEV8 164 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 CXCL1P09341 107 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 ZNF16P17020 682 aaPredicted RBP13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 CD200P41217 278 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 GLIPR1P48060 266 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 ERVFRD-1P60508 538 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 RAB11AP62491 216 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 TESK1Q15569 626 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 DCAF10Q5QP82 559 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 ZNF787Q6DD87 383 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 C1orf210Q8IVY1 113 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 NANOS1Q8WY41 292 aaKnown RBP13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 KCNS2Q9ULS6 477 aa13.99□□□□□ -0.17
SEMA3B-207ENST00000441915 COL27A1Q8IZC6 1860 aaPredicted RBP13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 WDR1O75083 606 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 YIF1AO95070 293 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 S100A2P29034 98 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 LURAP1Q96LR2 239 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 PSMG3Q9BT73 122 aaPredicted RBP13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 RTL8AQ9BWD3 113 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 GPR87Q9BY21 358 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 CISD1Q9NZ45 108 aaKnown RBP13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 SIRPB1O00241 398 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 IL18BPO95998 194 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 SFTPCP11686 197 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 CDX1P47902 265 aaPredicted RBP13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 LCN15Q6UWW0 184 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 OR1K1Q8NGR3 316 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 PPP1R14DQ9NXH3 145 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 FOXJ2Q9P0K8 574 aa13.98□□□□□ -0.17
SEMA3B-207ENST00000441915 ATXN7O15265 892 aaPredicted RBP13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 OR2H2O95918 312 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 IGKV1-5P01602 117 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 BCL2P10415 239 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 SERF2P84101 59 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 ZNF497Q6ZNH5 498 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 Q8IYB0 196 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 ZNF525Q8N782 197 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 ZNF610Q8N9Z0 462 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 CDX2Q99626 313 aaPredicted RBP13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 ZNF665Q9H7R5 613 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 POLDIP2Q9Y2S7 368 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 ZDBF2Q9HCK1 2354 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 IFITM10A6NMD0 228 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 MT-CO3P00414 261 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 HIST1H1BP16401 226 aaKnown RBP13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 ARL16Q0P5N6 197 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 PNRC1Q12796 327 aaPredicted RBP13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 MDP1Q86V88 176 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 MED12LQ86YW9 2145 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 S100PBPQ96BU1 408 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 VSIRQ9H7M9 311 aa13.97□□□□□ -0.17
SEMA3B-207ENST00000441915 TGIF2-C20orf24A0A0A6YYL0 155 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 A0A1W2PR80 420 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 NDUFA6P56556 154 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 IGFBP7Q16270 282 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 ZNF585BQ52M93 769 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 TMEM164Q5U3C3 297 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 FBXW9Q5XUX1 488 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 FAM90A2PQ658T7 463 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 MBD3L1Q8WWY6 194 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 TMEM9BQ9NQ34 198 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 GAR1Q9NY12 217 aaKnown RBP13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 DOK5Q9P104 306 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 ARHGAP21Q5T5U3 1957 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 FRYQ5TBA9 3013 aa13.96□□□□□ -0.17
SEMA3B-207ENST00000441915 C21orf140B9A014 251 aa13.96□□□□□ -0.18
SEMA3B-207ENST00000441915 CYB5BO43169 146 aa13.96□□□□□ -0.18
SEMA3B-207ENST00000441915 MEOX1P50221 254 aa13.96□□□□□ -0.18
SEMA3B-207ENST00000441915 TBC1D28Q2M2D7 210 aa13.96□□□□□ -0.18
SEMA3B-207ENST00000441915 LRRC75BQ2VPJ9 315 aa13.96□□□□□ -0.18
SEMA3B-207ENST00000441915 UBALD1Q8TB05 177 aa13.96□□□□□ -0.18
SEMA3B-207ENST00000441915 OR14J1Q9UGF5 321 aa13.96□□□□□ -0.18
SEMA3B-207ENST00000441915 CEACAM6P40199 344 aa13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 SPANXN5Q5MJ07 72 aa13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 SCCPDHQ8NBX0 429 aa13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 BCL2L2Q92843 193 aaPredicted RBP13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 GP6Q9HCN6 339 aa13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 KLF13Q9Y2Y9 288 aaPredicted RBP13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 R4GN57 208 aa13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 SLC10A1Q14973 349 aa13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 ZNF726P1Q15940 193 aa13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 ACSF3Q4G176 576 aaPredicted RBP13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 PINX1Q96BK5 328 aaKnown RBP13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 NEU1Q99519 415 aa13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 P2RX4Q99571 388 aa13.95□□□□□ -0.18
SEMA3B-207ENST00000441915 C19orf67A6NJJ6 358 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 KLRC4-KLRK1H3BQV0 150 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 NXPH2O95156 264 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 IFNA10P01566 189 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 SP1P08047 785 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 DDTP30046 118 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 FGF8P55075 233 aaPredicted RBP13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 WDR86Q86TI4 376 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 HAPLN4Q86UW8 402 aa13.94□□□□□ -0.18
SEMA3B-207ENST00000441915 VASH2Q86V25 355 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms