RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 A0A0B4J203 849 aa19.11■□□□□ 0.65
CPNE1-217ENST00000439669 C5orf56Q8N8D9 126 aa19.11■□□□□ 0.65
CPNE1-217ENST00000439669 OR2T10Q8NGZ9 312 aa19.11■□□□□ 0.65
CPNE1-217ENST00000439669 WIPF2Q8TF74 440 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-217ENST00000439669 EAF1Q96JC9 268 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-217ENST00000439669 CMSS1Q9BQ75 279 aaKnown RBP19.11■□□□□ 0.65
CPNE1-217ENST00000439669 TRBV6-6A0A0A6YYG2 114 aa19.1■□□□□ 0.65
CPNE1-217ENST00000439669 FGF16O43320 207 aa19.1■□□□□ 0.65
CPNE1-217ENST00000439669 LANCL1O43813 399 aa19.1■□□□□ 0.65
CPNE1-217ENST00000439669 HLA-DRB3P79483 266 aa19.1■□□□□ 0.65
CPNE1-217ENST00000439669 EBI3Q14213 229 aa19.1■□□□□ 0.65
CPNE1-217ENST00000439669 NSUN5P1Q3KNT7 163 aa19.1■□□□□ 0.65
CPNE1-217ENST00000439669 PLAC9Q5JTB6 97 aa19.1■□□□□ 0.65
CPNE1-217ENST00000439669 CENPVQ7Z7K6 275 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-217ENST00000439669 NR2C2APQ86WQ0 139 aa19.1■□□□□ 0.65
CPNE1-217ENST00000439669 OR2AK2Q8NG84 335 aa19.1■□□□□ 0.65
CPNE1-217ENST00000439669 OR5AU1Q8NGC0 362 aa19.1■□□□□ 0.65
CPNE1-217ENST00000439669 RAB3CQ96E17 227 aa19.1■□□□□ 0.65
CPNE1-217ENST00000439669 OR51E2Q9H255 320 aa19.1■□□□□ 0.65
CPNE1-217ENST00000439669 TRRAPQ9Y4A5 3859 aa19.09■□□□□ 0.65
CPNE1-217ENST00000439669 NCBP2LA6PVI3 153 aaKnown RBP19.09■□□□□ 0.65
CPNE1-217ENST00000439669 SLC2A2P11168 524 aaPredicted RBP19.09■□□□□ 0.65
CPNE1-217ENST00000439669 CD1BP29016 333 aa19.09■□□□□ 0.65
CPNE1-217ENST00000439669 MRPS15P82914 257 aaKnown RBP19.09■□□□□ 0.65
CPNE1-217ENST00000439669 CITED2Q99967 270 aaPredicted RBP19.09■□□□□ 0.65
CPNE1-217ENST00000439669 CHCHD6Q9BRQ6 235 aa19.09■□□□□ 0.65
CPNE1-217ENST00000439669 MGAT4AQ9UM21 535 aa19.09■□□□□ 0.65
CPNE1-217ENST00000439669 ZNF736B4DX44 427 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-217ENST00000439669 MOSP00540 346 aa19.08■□□□□ 0.64
CPNE1-217ENST00000439669 RAB6AP20340 208 aa19.08■□□□□ 0.64
CPNE1-217ENST00000439669 GADD45AP24522 165 aa19.08■□□□□ 0.64
CPNE1-217ENST00000439669 MOGAT2Q3SYC2 334 aa19.08■□□□□ 0.64
CPNE1-217ENST00000439669 LY6G6FQ5SQ64 297 aa19.08■□□□□ 0.64
CPNE1-217ENST00000439669 Q9N2K0 584 aa19.08■□□□□ 0.64
CPNE1-217ENST00000439669 SLC23A1Q9UHI7 598 aa19.08■□□□□ 0.64
CPNE1-217ENST00000439669 LOC100506127A0A0U1RQW1 187 aa19.07■□□□□ 0.64
CPNE1-217ENST00000439669 NOTOA8MTQ0 251 aa19.07■□□□□ 0.64
CPNE1-217ENST00000439669 ST8SIA5O15466 376 aa19.07■□□□□ 0.64
CPNE1-217ENST00000439669 CD3GP09693 182 aa19.07■□□□□ 0.64
CPNE1-217ENST00000439669 NDUFA11Q86Y39 141 aa19.07■□□□□ 0.64
CPNE1-217ENST00000439669 Q8N6K4 173 aa19.07■□□□□ 0.64
CPNE1-217ENST00000439669 OR10R2Q8NGX6 335 aa19.07■□□□□ 0.64
CPNE1-217ENST00000439669 A0A075B6Q4 140 aa19.06■□□□□ 0.64
CPNE1-217ENST00000439669 METTL21EPA6NDL7 271 aa19.06■□□□□ 0.64
CPNE1-217ENST00000439669 HSPA12AO43301 675 aa19.06■□□□□ 0.64
CPNE1-217ENST00000439669 LSAMPQ13449 338 aa19.06■□□□□ 0.64
CPNE1-217ENST00000439669 TPRA1Q86W33 373 aa19.06■□□□□ 0.64
CPNE1-217ENST00000439669 ODF3L1Q8IXM7 274 aa19.06■□□□□ 0.64
CPNE1-217ENST00000439669 KCTD7Q96MP8 289 aa19.06■□□□□ 0.64
CPNE1-217ENST00000439669 MRPL20Q9BYC9 149 aaKnown RBP19.06■□□□□ 0.64
CPNE1-217ENST00000439669 IFI27L2Q9H2X8 130 aa19.06■□□□□ 0.64
CPNE1-217ENST00000439669 OR1A1Q9P1Q5 309 aa19.06■□□□□ 0.64
CPNE1-217ENST00000439669 SAA2-SAA4A0A096LPE2 208 aa19.05■□□□□ 0.64
CPNE1-217ENST00000439669 SCTP09683 121 aa19.05■□□□□ 0.64
CPNE1-217ENST00000439669 SAA2P0DJI9 122 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-217ENST00000439669 GNB3P16520 340 aa19.05■□□□□ 0.64
CPNE1-217ENST00000439669 CD36P16671 472 aa19.05■□□□□ 0.64
CPNE1-217ENST00000439669 OR3A3P47888 321 aa19.05■□□□□ 0.64
CPNE1-217ENST00000439669 OR4X2Q8NGF9 303 aa19.05■□□□□ 0.64
CPNE1-217ENST00000439669 RBMXL1Q96E39 390 aaKnown RBP19.05■□□□□ 0.64
CPNE1-217ENST00000439669 PARP12Q9H0J9 701 aaKnown RBP19.05■□□□□ 0.64
CPNE1-217ENST00000439669 ATG5Q9H1Y0 275 aa19.05■□□□□ 0.64
CPNE1-217ENST00000439669 DAPK2Q9UIK4 370 aa19.05■□□□□ 0.64
CPNE1-217ENST00000439669 KCNK7Q9Y2U2 307 aa19.05■□□□□ 0.64
CPNE1-217ENST00000439669 A0A1W2PRX2 142 aa19.04■□□□□ 0.64
CPNE1-217ENST00000439669 RAB27BO00194 218 aa19.04■□□□□ 0.64
CPNE1-217ENST00000439669 HIST1H1DP16402 221 aaKnown RBP19.04■□□□□ 0.64
CPNE1-217ENST00000439669 ZBTB25P24278 435 aa19.04■□□□□ 0.64
CPNE1-217ENST00000439669 SDC2P34741 201 aa19.04■□□□□ 0.64
CPNE1-217ENST00000439669 MXD1Q05195 221 aa19.04■□□□□ 0.64
CPNE1-217ENST00000439669 ZNF833PQ6ZTB9 187 aa19.04■□□□□ 0.64
CPNE1-217ENST00000439669 SLC35E3Q7Z769 313 aa19.04■□□□□ 0.64
CPNE1-217ENST00000439669 PTX4Q96A99 478 aa19.04■□□□□ 0.64
CPNE1-217ENST00000439669 SERPINE3A8MV23 424 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 TRDCB7Z8K6 153 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 MFNGO00587 321 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 CEACAM6P40199 344 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 CD83Q01151 205 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 KHDC1LQ5JSQ8 128 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 SFXN4Q6P4A7 337 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 C10orf99Q6UWK7 81 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 Q8N9W7 124 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 OR8H1Q8NGG4 311 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 R3HDM4Q96D70 268 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 NABP2Q9BQ15 211 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 RNF167Q9H6Y7 350 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 VCX3AQ9NNX9 186 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 LIN7CQ9NUP9 197 aaKnown RBP19.03■□□□□ 0.64
CPNE1-217ENST00000439669 PIPOXQ9P0Z9 390 aa19.03■□□□□ 0.64
CPNE1-217ENST00000439669 PKD1L1Q8TDX9 2849 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 TCRBV4S1A1TA0A5B7 111 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 PSMB11A5LHX3 300 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 ADARB2-AS1A8MUL3 147 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 RAB29O14966 203 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 TNFAIP8O95379 198 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 OPN1MWP04001 364 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 FCGR3AP08637 254 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 OPN1MW2P0DN77 364 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 OPN1MW3P0DN78 364 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 ARFRP1Q13795 201 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms