RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 GNMTQ14749 295 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 MOGAT2Q3SYC2 334 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 CT45A1Q5HYN5 189 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 LY6G6FQ5SQ64 297 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 IDNKQ5T6J7 187 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 MOB3BQ86TA1 216 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 TGIF2LXQ8IUE1 241 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 CROCCP3Q8IVE0 287 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 LYG1Q8N1E2 194 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 DRAM1Q8N682 238 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 OR2AK2Q8NG84 335 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 CT45A3Q8NHU0 189 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 SGMS2Q8NHU3 365 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 LGALS14Q8TCE9 139 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 PHF21AQ96BD5 680 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 RBM14Q96PK6 669 aaKnown RBP9.18□□□□□ -0.94
COL28A1-203ENST00000435823 YPEL2Q96QA6 119 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 SLC25A33Q9BSK2 321 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 ABHD14AQ9BUJ0 271 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 Q9N2K0 584 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 ETV7Q9Y603 341 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 ANK2Q01484 3957 aa9.18□□□□□ -0.94
COL28A1-203ENST00000435823 IGHV1-3A0A0C4DH29 117 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 FAM90A9PA6NNJ1 464 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 M0QZK8 103 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 MFNGO00587 321 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 HSPA12AO43301 675 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 PEX14O75381 377 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 SNRNP70P08621 437 aaKnown RBP9.17□□□□□ -0.94
COL28A1-203ENST00000435823 GNB3P16520 340 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 ZBTB25P24278 435 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 TALDO1P37837 337 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 ZNF134P52741 427 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 LSM3P62310 102 aaKnown RBP9.17□□□□□ -0.94
COL28A1-203ENST00000435823 ARFRP1Q13795 201 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 Q6ZPA2 131 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 C5orf24Q7Z6I8 188 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 RTN4IP1Q8WWV3 396 aaPredicted RBP9.17□□□□□ -0.94
COL28A1-203ENST00000435823 CFHR4Q92496 578 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 RHBDL2Q9NX52 303 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 KCNK7Q9Y2U2 307 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 SIGLEC9Q9Y336 463 aa9.17□□□□□ -0.94
COL28A1-203ENST00000435823 TRDCB7Z8K6 153 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 IGKV1D-33P01593 117 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 IGKV1-33P01594 117 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 TMEM11P17152 192 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 ZNF137PP52743 207 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 HABP2Q14520 560 aaPredicted RBP9.16□□□□□ -0.94
COL28A1-203ENST00000435823 KIR2DS1Q14954 304 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 OR13F1Q8NGS4 319 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 EDARADDQ8WWZ3 215 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 ST6GALNAC6Q969X2 333 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 FUNDC2Q9BWH2 189 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 MRPS26Q9BYN8 205 aaKnown RBP9.16□□□□□ -0.94
COL28A1-203ENST00000435823 ZNF702PQ9H963 129 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 SLC23A1Q9UHI7 598 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 MOB4Q9Y3A3 225 aa9.16□□□□□ -0.94
COL28A1-203ENST00000435823 LANCL1O43813 399 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 FCGR3AP08637 254 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 SCTP09683 121 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 SMIM18P0DKX4 95 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 VSIG10L2P0DP72 767 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 CD1BP29016 333 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 TGFBR1P36897 503 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 CEACAM6P40199 344 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 SERPINB10P48595 397 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 BLCAPP62952 87 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 CDNFQ49AH0 187 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 IZUMO1Q8IYV9 350 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 Q8N2B8 174 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 KLHDC1Q8N7A1 406 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 OR4A4PQ8NGN8 299 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 OR2T10Q8NGZ9 312 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 CITED1Q99966 193 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.15□□□□□ -0.94
COL28A1-203ENST00000435823 PIPOXQ9P0Z9 390 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 SPATA2Q9UM82 520 aa9.15□□□□□ -0.94
COL28A1-203ENST00000435823 IGHV3-72A0A0B4J1Y9 119 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 ITGB1BP1O14713 200 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 RAB29O14966 203 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 FABP7O15540 132 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 GSTP1P09211 210 aaKnown RBP9.14□□□□□ -0.95
COL28A1-203ENST00000435823 DTYMKP23919 212 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 RPS19P39019 145 aaKnown RBP9.14□□□□□ -0.95
COL28A1-203ENST00000435823 VDAC2P45880 294 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-203ENST00000435823 GNG2P59768 71 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 PITPNAQ00169 270 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 SRSF4Q08170 494 aaKnown RBP9.14□□□□□ -0.95
COL28A1-203ENST00000435823 HNF4GQ14541 408 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 HERPUD1Q15011 391 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 SRSF7Q16629 238 aaKnown RBP eCLIP9.14□□□□□ -0.95
COL28A1-203ENST00000435823 PNLIPRP3Q17RR3 467 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 ABCA11PQ4W5N1 156 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 HACD4Q5VWC8 232 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 FAM71F2Q6NXP2 309 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 OR5H6Q8NGV6 325 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 EAF1Q96JC9 268 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-203ENST00000435823 S1PR3Q99500 378 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 GHITMQ9H3K2 345 aa9.14□□□□□ -0.95
COL28A1-203ENST00000435823 DIABLOQ9NR28 239 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms