RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 GPR82Q96P67 336 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 SFXN3Q9BWM7 321 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 PPIAL4CA0A0B4J2A2 164 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 CGB1A6NKQ9 187 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 PPYP01298 95 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 PPIAL4GP0DN37 164 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 ERVS71-1P61550 626 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 RAB32Q13637 225 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 SLC25A53Q5H9E4 307 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 SLC16A13Q7RTY0 426 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 WDFY1Q8IWB7 410 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 OR10D4PQ8NGN7 298 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 HSPB7Q9UBY9 170 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 LOC107984156A0A0G2JMH3 177 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 ARL17AQ8IVW1 177 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 RPP25Q9BUL9 199 aaKnown RBP9.78□□□□□ -0.84
SCN4A-201ENST00000435607 PEMTQ9UBM1 199 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 MRM1Q6IN84 353 aaKnown RBP9.77□□□□□ -0.84
SCN4A-201ENST00000435607 CCL13Q99616 98 aa9.77□□□□□ -0.84
SCN4A-201ENST00000435607 ZNF688P0C7X2 276 aa9.77□□□□□ -0.84
SCN4A-201ENST00000435607 CFAP161Q6P656 301 aa9.77□□□□□ -0.84
SCN4A-201ENST00000435607 GAPTQ8N292 157 aa9.77□□□□□ -0.84
SCN4A-201ENST00000435607 ADAT3Q96EY9 351 aaPredicted RBP9.77□□□□□ -0.84
SCN4A-201ENST00000435607 ASAH2BP0C7U1 165 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 CCL3P10147 92 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 SPTBP11277 2137 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 UCP2P55851 309 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 LINC01465Q8N7H1 131 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 SERGEFQ9UGK8 458 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 KDM3BQ7LBC6 1761 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 STAG3L3P0CL85 134 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 RPL8P62917 257 aaKnown RBP9.77□□□□□ -0.85
SCN4A-201ENST00000435607 SMRP1Q8NCR6 262 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 ELOVL5Q9NYP7 299 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 MRPL54Q6P161 138 aaKnown RBP9.77□□□□□ -0.85
SCN4A-201ENST00000435607 C16orf47Q6ZP98 133 aaPredicted RBP9.77□□□□□ -0.85
SCN4A-201ENST00000435607 ZNF680Q8NEM1 530 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 ECM29Q5VYK3 1845 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 LOC102724200A0A096LPH7 203 aaPredicted RBP9.77□□□□□ -0.85
SCN4A-201ENST00000435607 B9A039 149 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 MALP21145 153 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 ANOS1P23352 680 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 MRGPRFQ96AM1 343 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 RTN4RQ9BZR6 473 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 OPN4Q9UHM6 478 aa9.77□□□□□ -0.85
SCN4A-201ENST00000435607 A0A1W2PQM1 296 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 DLL1O00548 723 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 RNF167Q9H6Y7 350 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 ZFPL1O95159 310 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 DPPA3Q6W0C5 159 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 GTSCR1Q86UQ5 136 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 DYRK2Q92630 601 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 TNFRSF18Q9Y5U5 241 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 KBTBD11O94819 623 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 MPC2O95563 127 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 CTF1Q16619 201 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 TMEM45BQ96B21 275 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 PGLYRP3Q96LB9 341 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 C12orf57Q99622 126 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 OTOFQ9HC10 1997 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 M0QZK8 103 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 HOXA3O43365 443 aaPredicted RBP9.76□□□□□ -0.85
SCN4A-201ENST00000435607 GGCTO75223 188 aaKnown RBP9.76□□□□□ -0.85
SCN4A-201ENST00000435607 CEACAM4O75871 244 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 PMS2CLQ68D20 193 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 MAVSQ7Z434 540 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 HMGCLL1Q8TB92 370 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 USP54Q70EL1 1684 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 RPL36A-HNRNPH2H7BZ11 118 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 SLC25A17O43808 307 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 CA2P00918 260 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 CISD3P0C7P0 127 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 HTN3P15516 51 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 COL9A1P20849 921 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 C2orf83Q53S99 150 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 CLRN3Q8NCR9 226 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 FCGR2BP31994 310 aaPredicted RBP9.76□□□□□ -0.85
SCN4A-201ENST00000435607 COL5A1-AS1Q5SY13 56 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 NSUN5P2Q63ZY6 315 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 CTXND1A0A1B0GTU2 59 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 CGB2Q6NT52 195 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 OPN3Q9H1Y3 402 aaPredicted RBP9.76□□□□□ -0.85
SCN4A-201ENST00000435607 NRAPQ86VF7 1730 aa9.76□□□□□ -0.85
SCN4A-201ENST00000435607 ALX3O95076 343 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 OR8G5Q8NG78 346 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 AHDC1Q5TGY3 1603 aaPredicted RBP9.75□□□□□ -0.85
SCN4A-201ENST00000435607 CDKN2AP42771 156 aaKnown RBP9.75□□□□□ -0.85
SCN4A-201ENST00000435607 FAM27D1Q5T7N8 215 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 C1orf53Q5VUE5 145 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 FAM168AQ92567 244 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 COLQQ9Y215 455 aaPredicted RBP9.75□□□□□ -0.85
SCN4A-201ENST00000435607 RBMY1BA6NDE4 496 aaKnown RBP9.75□□□□□ -0.85
SCN4A-201ENST00000435607 RBMY1EA6NEQ0 496 aaKnown RBP9.75□□□□□ -0.85
SCN4A-201ENST00000435607 SYNGR3O43761 229 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 RBMY1DP0C7P1 496 aaKnown RBP9.75□□□□□ -0.85
SCN4A-201ENST00000435607 RBMY1A1P0DJD3 496 aaKnown RBP9.75□□□□□ -0.85
SCN4A-201ENST00000435607 RBMY1CP0DJD4 496 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 OR10AC1Q8NH08 325 aa9.75□□□□□ -0.85
SCN4A-201ENST00000435607 EXOGQ9Y2C4 368 aaKnown RBP9.75□□□□□ -0.85
SCN4A-201ENST00000435607 A0A1W2PPC1 479 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms