RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TMEM204Q9BSN7 226 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 PSMG3Q9BT73 122 aaPredicted RBP9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 TMEM106BQ9NUM4 274 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 FOXJ2Q9P0K8 574 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 C1QTNF9P0C862 333 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 DRD1P21728 446 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 MSX1P28360 303 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 ADMP35318 185 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 TMPRSS7Q7RTY8 843 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 TRAV34A0A0B4J273 112 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 C11orf94C9JXX5 98 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 WDR1O75083 606 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 LINC00614P0C842 121 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 RAB7AP51149 207 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 ZNF709Q8N972 641 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 DERL1Q9BUN8 251 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 TRANK1O15050 2925 aa9.85□□□□□ -0.83
HMGCS1-202ENST00000433297 LILRA5A6NI73 299 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 IGHV3-9P01782 118 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 SRP14P37108 136 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 GPM6AP51674 278 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 KRTDAPP60985 99 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 RPP30P78346 268 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 MMDQ15546 238 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 TMEM183BQ1AE95 376 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 FFAR4Q5NUL3 377 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 Q6ZWC4 215 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 BAGE3Q86Y29 109 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 BAGE2Q86Y30 109 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 CARFQ8N187 725 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 NEIL1Q96FI4 390 aaPredicted RBP9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 AGMATQ9BSE5 352 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 TMEM9BQ9NQ34 198 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 PRUNE2Q8WUY3 3088 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 TMEM250H0YL14 139 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 AQP7O14520 342 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 TUSC2O75896 110 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 PTGDSP41222 190 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 THBS3P49746 956 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 HIPK2Q9H2X6 1198 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 TNFSF11O14788 317 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 RBMXL2O75526 392 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 NDUFB4O95168 129 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 CBLN1P23435 193 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 TPPP2P59282 170 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 GAGE1Q13065 139 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 TIPARPQ7Z3E1 657 aaKnown RBP9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 WDYHV1Q96HA8 205 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 ZNF488Q96MN9 340 aa9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 CIB3Q96Q77 187 aaPredicted RBP9.84□□□□□ -0.83
HMGCS1-202ENST00000433297 KIR2DS1A0A191URI9 304 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 A0A1W2PPC4 97 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 KIAA1324LA8MWY0 1029 aaPredicted RBP9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 CCL2P13500 99 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 CHRNB4P30926 498 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 KIR2DS4P43632 304 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 KIR2DS1Q14954 304 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 SPINK9Q5DT21 86 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 C20orf204Q6ZNR8 217 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 DEFB126Q9BYW3 111 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 TNFSF13O75888 250 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 NAPSAO96009 420 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 CFHR1Q03591 330 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 FAM27BQ5VT28 67 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 C9orf135Q5VTT2 229 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 ASCL4Q6XD76 172 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 Q6ZS52 159 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 BTF3L4Q96K17 158 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 ASCL3Q9NQ33 180 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 PXMP4Q9Y6I8 212 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 C5orf67F2Z3F1 127 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 SYNGR3O43761 229 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 SERF1AO75920 110 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 ZFAND5O76080 213 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 NPPCP23582 126 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 CARD18P57730 90 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 COL5A1-AS1Q5SY13 56 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 C10orf128Q5T292 105 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 ETFRF1Q6IPR1 90 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 NFAM1Q8NET5 270 aaPredicted RBP9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 FGFBP3Q8TAT2 258 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 HLA-CQ95604 372 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 CLDN23Q96B33 292 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 OR51B6Q9H340 312 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 GPR35Q9HC97 309 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 OR1A1Q9P1Q5 309 aa9.83□□□□□ -0.84
HMGCS1-202ENST00000433297 CTXND1A0A1B0GTU2 59 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 SPINK4O60575 86 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 IGKV1-39P01597 117 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 IGKV1D-39P04432 117 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 SERPINA7P05543 415 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 CRYGSP22914 178 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 ATP5G3P48201 142 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 PTTG1IPP53801 180 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 ZXDAP98168 799 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 PSG4Q00888 419 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 Q6ZVH6 145 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 OR5AU1Q8NGC0 362 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 TMEM54Q969K7 222 aa9.82□□□□□ -0.84
HMGCS1-202ENST00000433297 CD207Q9UJ71 328 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms