RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 FAM162BQ5T6X4 162 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 MRPL55Q7Z7F7 128 aaKnown RBP1.85□□□□□ -2.11
CLK1-204ENST00000432425 NAA40Q86UY6 237 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 IFT20Q8IY31 132 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 C6orf223Q8N319 242 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 NKAPP1Q8N9T2 125 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 UBAC2Q8NBM4 344 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 OR52L1Q8NGH7 329 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 OR4D11Q8NGI4 311 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 OR51A2Q8NGJ7 313 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 OR5H6Q8NGV6 325 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 CT45A3Q8NHU0 189 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 MCFD2Q8NI22 146 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 C1orf54Q8WWF1 131 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 PIK3IP1Q96FE7 263 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 FCRL1Q96LA6 429 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 CCDC115Q96NT0 180 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 CDX2Q99626 313 aaPredicted RBP1.85□□□□□ -2.11
CLK1-204ENST00000432425 EMC6Q9BV81 110 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 COA1Q9GZY4 146 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 CISHQ9NSE2 258 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 TMEM100Q9NV29 134 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 ZNF230Q9UIE0 474 aaPredicted RBP1.85□□□□□ -2.11
CLK1-204ENST00000432425 ANXA10Q9UJ72 324 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 HSPB8Q9UJY1 196 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 ST3GAL6Q9Y274 331 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 POLR1DQ9Y2S0 133 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 HDGFL3Q9Y3E1 203 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 ZNF780BQ9Y6R6 833 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 A0A1W2PP64 1363 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 DHX57Q6P158 1386 aaKnown RBP1.85□□□□□ -2.11
CLK1-204ENST00000432425 GRIN2BQ13224 1484 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 NUP214P35658 2090 aaPredicted RBP1.85□□□□□ -2.11
CLK1-204ENST00000432425 PTPRJQ12913 1337 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 PDS5BQ9NTI5 1447 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 ERICH3Q5RHP9 1530 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 MYO15BQ96JP2 1530 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 FAM135AQ9P2D6 1515 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 NISCHQ9Y2I1 1504 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 ITGB4P16144 1822 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 DNMBPQ6XZF7 1577 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 UHRF1BP1LA0JNW5 1464 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 IGKV1D-17A0A075B6S4 117 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 RBMY1BA6NDE4 496 aaKnown RBP1.84□□□□□ -2.11
CLK1-204ENST00000432425 RBMY1EA6NEQ0 496 aaKnown RBP1.84□□□□□ -2.11
CLK1-204ENST00000432425 ZNF726A6NNF4 738 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 ZNF850A8MQ14 1090 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 F6UZH7 168 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 K7ERU9 68 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 DEGS1O15121 323 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 SPAG7O75391 227 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 BANF1O75531 89 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 SCO1O75880 301 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 CDS2O95674 445 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 FAM107AO95990 144 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 C1QBP02746 253 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 RBMY1DP0C7P1 496 aaKnown RBP1.84□□□□□ -2.11
CLK1-204ENST00000432425 GKN3PP0CG01 181 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 RBMY1A1P0DJD3 496 aaKnown RBP1.84□□□□□ -2.11
CLK1-204ENST00000432425 SPI1P17947 270 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 MYL12AP19105 171 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 DDTP30046 118 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 S100A11P31949 105 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 RORCP51449 518 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 GPM6AP51674 278 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 DEFA3P59666 94 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 BAXQ07812 192 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 GINS1Q14691 196 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 QPRTQ15274 297 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 LY6EQ16553 131 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 CEACAM16Q2WEN9 425 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 NANOGP8Q6NSW7 305 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 TNFAIP8L2Q6P589 184 aaPredicted RBP1.84□□□□□ -2.11
CLK1-204ENST00000432425 TBPL2Q6SJ96 375 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 TOMM20LQ6UXN7 152 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 NEGR1Q7Z3B1 354 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 C6orf120Q7Z4R8 191 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 TMEM150AQ86TG1 271 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 ZCCHC24Q8N2G6 241 aaKnown RBP1.84□□□□□ -2.11
CLK1-204ENST00000432425 OR2K2Q8NGT1 345 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 MFSD8Q8NHS3 518 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 BLNKQ8WV28 456 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 FGF14Q92915 247 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 TMEM54Q969K7 222 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 PAGE5Q96GU1 130 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 NARS2Q96I59 477 aaKnown RBP1.84□□□□□ -2.11
CLK1-204ENST00000432425 IP6K3Q96PC2 410 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 HDHD3Q9BSH5 251 aaPredicted RBP1.84□□□□□ -2.11
CLK1-204ENST00000432425 TAS2R5Q9NYW4 299 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 CALML5Q9NZT1 146 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 COMMD9Q9P000 198 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 U3KQ87 197 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 BCORL1Q5H9F3 1711 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 HECW1Q76N89 1606 aa1.84□□□□□ -2.11
CLK1-204ENST00000432425 ZNF609O15014 1411 aa1.84□□□□□ -2.12
CLK1-204ENST00000432425 MIA2Q96PC5 1412 aa1.84□□□□□ -2.12
CLK1-204ENST00000432425 CDK5RAP2Q96SN8 1893 aa1.84□□□□□ -2.12
CLK1-204ENST00000432425 CAMTA1Q9Y6Y1 1673 aa1.84□□□□□ -2.12
CLK1-204ENST00000432425 EIF4G3O43432 1585 aaKnown RBP1.84□□□□□ -2.12
CLK1-204ENST00000432425 TRIOBPQ9H2D6 2365 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms