RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 MT-CO3P00414 261 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 IGKV1-13P0DP09 117 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 PSG2P11465 335 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 CEACAM1P13688 526 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 CCL1P22362 96 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 MLF1P58340 268 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 DEFA6Q01524 100 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 TLE4Q04727 773 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 MRPL49Q13405 166 aaKnown RBP6.92□□□□□ -1.3
HPS4-205ENST00000429411 IL13RA2Q14627 380 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 MRPL14Q6P1L8 145 aaKnown RBP6.92□□□□□ -1.3
HPS4-205ENST00000429411 SHISA2Q6UWI4 295 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 C15orf54Q8N8G6 183 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 FADS6Q8N9I5 356 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 NTNG2Q96CW9 530 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 UNKLQ9H9P5 680 aaKnown RBP6.92□□□□□ -1.3
HPS4-205ENST00000429411 RAXQ9Y2V3 346 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 ABCA1O95477 2261 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 MED13Q9UHV7 2174 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 HEATR1Q9H583 2144 aaKnown RBP6.92□□□□□ -1.3
HPS4-205ENST00000429411 USF3Q68DE3 2245 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 KIR2DS1A0A191URI9 304 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 PROB1E7EW31 1015 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 LY86O95711 162 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 CST2P09228 141 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 SEC11BP0C7V7 166 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 RAB4AP20338 218 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 DTYMKP23919 212 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 MPZP25189 248 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 IL2RGP31785 369 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 KIR2DS4P43632 304 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 EDDM3AQ14507 147 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 KIR2DS1Q14954 304 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 OXLD1Q5BKU9 147 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 SLC25A53Q5H9E4 307 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 C10orf128Q5T292 105 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 TMEM54Q969K7 222 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 FER1L6-AS2Q96M78 137 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 TM2D1Q9BX74 207 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 ZNF552Q9H707 407 aaPredicted RBP6.92□□□□□ -1.3
HPS4-205ENST00000429411 PLA2G2EQ9NZK7 142 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 STRAPQ9Y3F4 350 aaKnown RBP6.92□□□□□ -1.3
HPS4-205ENST00000429411 ATMQ13315 3056 aa6.92□□□□□ -1.3
HPS4-205ENST00000429411 CCDC168Q8NDH2 2452 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 UBE2L5PA0A1B0GUS4 154 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 ZNF729A6NN14 1252 aaPredicted RBP6.91□□□□□ -1.3
HPS4-205ENST00000429411 COLCA2A8K830 154 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 IGHV2-70P01814 119 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 GAPDHP04406 335 aaKnown RBP6.91□□□□□ -1.3
HPS4-205ENST00000429411 DANCRP0C864 163 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 MMP9P14780 707 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 RAB4BP61018 213 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 UBE2NP61088 152 aaKnown RBP6.91□□□□□ -1.3
HPS4-205ENST00000429411 SRPXP78539 464 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 DLK1P80370 383 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 USF2Q15853 346 aaPredicted RBP6.91□□□□□ -1.3
HPS4-205ENST00000429411 ZNF787Q6DD87 383 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 TPRX1Q8N7U7 411 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 OR10D4PQ8NGN7 298 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 CT55Q8WUE5 264 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 RAB39BQ96DA2 213 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 CDH20Q9HBT6 801 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 PINLYPA6NC86 204 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 DEFB108AA8MXU0 73 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 TRDCB7Z8K6 153 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 SCGB2A1O75556 95 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 KLF7O75840 302 aaPredicted RBP6.91□□□□□ -1.3
HPS4-205ENST00000429411 CDKN1BP46527 198 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 GABRA2P47869 451 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 CEBPDP49716 269 aaPredicted RBP6.91□□□□□ -1.3
HPS4-205ENST00000429411 RND3P61587 244 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 TMPRSS7Q7RTY8 843 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 MOB3AQ96BX8 217 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 TCEAL7Q9BRU2 100 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 STRADBQ9C0K7 418 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 MS4A5Q9H3V2 200 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 DEPPQ9NTK1 212 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 SLC39A9Q9NUM3 307 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 AURKAIP1Q9NWT8 199 aaPredicted RBP6.91□□□□□ -1.3
HPS4-205ENST00000429411 DLL3Q9NYJ7 618 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 PSENENQ9NZ42 101 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 NUP210LQ5VU65 1888 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 GTF3C1Q12789 2109 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 IGHV3-43A0A0B4J1X8 118 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 IGHV3-43DP0DP04 118 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 H3F3AP84243 136 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 KCNMB1Q16558 191 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 LFNGQ8NES3 379 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 IMMP1LQ96LU5 166 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 ZNF665Q9H7R5 613 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 ASCL3Q9NQ33 180 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 OR1A1Q9P1Q5 309 aa6.91□□□□□ -1.3
HPS4-205ENST00000429411 hCG_38984A0A1B0GV85 526 aa6.9□□□□□ -1.3
HPS4-205ENST00000429411 ZNF705GA8MUZ8 300 aaPredicted RBP6.9□□□□□ -1.3
HPS4-205ENST00000429411 STAG3L2P0CL84 134 aa6.9□□□□□ -1.3
HPS4-205ENST00000429411 ALKBH6Q3KRA9 238 aa6.9□□□□□ -1.3
HPS4-205ENST00000429411 ZNF880Q6PDB4 577 aa6.9□□□□□ -1.3
HPS4-205ENST00000429411 FAM185AQ8N0U4 392 aa6.9□□□□□ -1.3
HPS4-205ENST00000429411 ZNF709Q8N972 641 aa6.9□□□□□ -1.3
HPS4-205ENST00000429411 LHX4Q969G2 390 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms