RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 TMEM222Q9H0R3 208 aa7.5□□□□□ -1.21
NR1I3-209ENST00000428574 PATZ1Q9HBE1 687 aaKnown RBP7.5□□□□□ -1.21
NR1I3-209ENST00000428574 BEX1Q9HBH7 125 aa7.5□□□□□ -1.21
NR1I3-209ENST00000428574 IDI2-AS1Q9NZ38 188 aa7.5□□□□□ -1.21
NR1I3-209ENST00000428574 GNG12Q9UBI6 72 aa7.5□□□□□ -1.21
NR1I3-209ENST00000428574 CTSZQ9UBR2 303 aa7.5□□□□□ -1.21
NR1I3-209ENST00000428574 TMEM56-RWDD3S4R434 201 aa7.5□□□□□ -1.21
NR1I3-209ENST00000428574 FAM208BQ5VWN6 2430 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 RELNP78509 3460 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 C3orf85A0A1B0GTC6 90 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 A8MXK9 166 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 RBFOX2O43251 390 aaKnown RBP eCLIP7.49□□□□□ -1.21
NR1I3-209ENST00000428574 PPIHO43447 177 aaKnown RBP7.49□□□□□ -1.21
NR1I3-209ENST00000428574 PGLYRP1O75594 196 aaPredicted RBP7.49□□□□□ -1.21
NR1I3-209ENST00000428574 ATG12O94817 140 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 IFNA21P01568 189 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 SELLP14151 372 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 PDLIM4P50479 330 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 CD83Q01151 205 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 TAGLNQ01995 201 aaKnown RBP7.49□□□□□ -1.21
NR1I3-209ENST00000428574 CATR1Q13166 79 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 TMEM187Q14656 261 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 CARTPTQ16568 116 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 WDR25Q64LD2 544 aaPredicted RBP7.49□□□□□ -1.21
NR1I3-209ENST00000428574 TMEM200BQ69YZ2 307 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 SP5Q6BEB4 398 aaPredicted RBP7.49□□□□□ -1.21
NR1I3-209ENST00000428574 LYPD2Q6UXB3 125 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 ZNF818PQ6ZRF7 136 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 C1orf122Q6ZSJ8 110 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 PRR18Q8N4B5 295 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 LINC00311Q8N616 119 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 TPRX1Q8N7U7 411 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 GSX2Q9BZM3 304 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 NMES1Q9C002 83 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 RANGRFQ9HD47 186 aaPredicted RBP7.49□□□□□ -1.21
NR1I3-209ENST00000428574 ZFP57Q9NU63 452 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 TMED3Q9Y3Q3 217 aa7.49□□□□□ -1.21
NR1I3-209ENST00000428574 RBM7Q9Y580 266 aaKnown RBP7.49□□□□□ -1.21
NR1I3-209ENST00000428574 A0A1B0GW55 424 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 C17orf98A8MV24 154 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 M0R1W7 72 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 GOSR2O14653 212 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 ZNF205O95201 554 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 CDS2O95674 445 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 TFF1P04155 84 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 OR8U9P0C7N5 309 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 DUX4L2P0CJ85 424 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 DUX4L3P0CJ86 424 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 DUX4L4P0CJ87 422 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 DUX4L5P0CJ88 424 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 DUX4L6P0CJ89 424 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 DUX4L7P0CJ90 424 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 PET100P0DJ07 73 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 SLC25A6P12236 298 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 CXCL3P19876 107 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 PI3P19957 117 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 PPP1CCP36873 323 aaKnown RBP7.48□□□□□ -1.21
NR1I3-209ENST00000428574 CDKN1AP38936 164 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 KIR2DS2P43631 304 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 GZMKP49863 264 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 DLX6P56179 175 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 H2BFSP57053 126 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 CACNA1DQ01668 2161 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 EIF4EBP1Q13541 118 aaPredicted RBP7.48□□□□□ -1.21
NR1I3-209ENST00000428574 ANKRD55Q3KP44 614 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 DUX4L9Q6RFH8 374 aaPredicted RBP7.48□□□□□ -1.21
NR1I3-209ENST00000428574 GSG1LQ6UXU4 331 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 SLC25A48Q6ZT89 311 aaKnown RBP7.48□□□□□ -1.21
NR1I3-209ENST00000428574 TBC1D26Q86UD7 250 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 NOXA1Q86UR1 476 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 DRAM1Q8N682 238 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 ZNF439Q8NDP4 499 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 LY6G5BQ8NDX9 201 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 OR8U1Q8NH10 309 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 CASTOR1Q8WTX7 329 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 GLYATL2Q8WU03 294 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 MSI2Q96DH6 328 aaKnown RBP7.48□□□□□ -1.21
NR1I3-209ENST00000428574 ABHD14BQ96IU4 210 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 ADTRPQ96IZ2 230 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 SPIN2AQ99865 258 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 SPIN2BQ9BPZ2 258 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 ABHD14AQ9BUJ0 271 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 OR2D2Q9H210 308 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 CCL28Q9NRJ3 127 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 C19orf12Q9NSK7 152 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 PIPOXQ9P0Z9 390 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 DUX4Q9UBX2 424 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 CACFD1Q9UGQ2 172 aa7.48□□□□□ -1.21
NR1I3-209ENST00000428574 POLR3KQ9Y2Y1 108 aaPredicted RBP7.48□□□□□ -1.21
NR1I3-209ENST00000428574 SPTBN1Q01082 2364 aaKnown RBP7.48□□□□□ -1.21
NR1I3-209ENST00000428574 TRAV39A0A0B4J263 110 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 RAB29O14966 203 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 FCN3O75636 299 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 IGLV2-14P01704 120 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 IGHV2-5P01817 119 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 SERPINE2P07093 398 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 LIPFP07098 398 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 OR5AC1P0C628 307 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 C4BPBP20851 252 aa7.47□□□□□ -1.21
NR1I3-209ENST00000428574 VDAC1P21796 283 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms