RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 LY6EQ16553 131 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 CT45A1Q5HYN5 189 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 C8orf86Q6ZUL3 223 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 C6orf201Q7Z4U5 140 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 NDUFA11Q86Y39 141 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 OR51D1Q8NGF3 324 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 OR4A4PQ8NGN8 299 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 OR4K15Q8NH41 348 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 CT45A3Q8NHU0 189 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 RFESDQ8TAC1 157 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 FAM46BQ96A09 425 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 AGMATQ9BSE5 352 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 ABHD14AQ9BUJ0 271 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 DCSTAMPQ9H295 470 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 Q9N2K0 584 aa7.29□□□□□ -1.24
SMC1A-203ENST00000428014 A0A0A6YYD4 124 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 TMEM272A0A1B0GTI8 110 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 SHISA3A0PJX4 238 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 OR5H14A6NHG9 310 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 MFNGO00587 321 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 MOSP00540 346 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 OPN1MWP04001 364 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 GSTP1P09211 210 aaKnown RBP7.28□□□□□ -1.24
SMC1A-203ENST00000428014 CTXN2P0C2S0 81 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 OPN1MW2P0DN77 364 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 OPN1MW3P0DN78 364 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 HIST1H1DP16402 221 aaKnown RBP7.28□□□□□ -1.24
SMC1A-203ENST00000428014 MC5RP33032 325 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 HLA-DRB3P79483 266 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 CD83Q01151 205 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 PNLIPRP3Q17RR3 467 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 PLA1AQ53H76 456 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 BAIAP2L2Q6UXY1 529 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 ZNF833PQ6ZTB9 187 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 KLHDC1Q8N7A1 406 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 OR2AK2Q8NG84 335 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 OR10R2Q8NGX6 335 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 CHPT1Q8WUD6 406 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 RAB3CQ96E17 227 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 CMTM3Q96MX0 182 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 S1PR3Q99500 378 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 NICN1Q9BSH3 213 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 FAAP24Q9BTP7 215 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 CABLES2Q9BTV7 478 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 PECRQ9BY49 303 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 ABCG5Q9H222 651 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 TNFRSF19Q9NS68 423 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 SLC23A1Q9UHI7 598 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 VWFP04275 2813 aa7.28□□□□□ -1.24
SMC1A-203ENST00000428014 TET2Q6N021 2002 aaPredicted RBP7.27□□□□□ -1.25
SMC1A-203ENST00000428014 UBE2QL1A1L167 161 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 TRDCB7Z8K6 153 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 SOCS1O15524 211 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 SLC22A5O76082 557 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 TPPPO94811 219 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 SNRNP70P08621 437 aaKnown RBP7.27□□□□□ -1.25
SMC1A-203ENST00000428014 OR5H8P0DN80 308 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 VDAC2P45880 294 aaPredicted RBP7.27□□□□□ -1.25
SMC1A-203ENST00000428014 RAB13P51153 203 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 ZNF134P52741 427 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 MRPS15P82914 257 aaKnown RBP7.27□□□□□ -1.25
SMC1A-203ENST00000428014 LSAMPQ13449 338 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 PLAC9Q5JTB6 97 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 NKAPLQ5M9Q1 402 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 C22orf42Q6IC83 251 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 OR10K2Q6IF99 312 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 SFXN4Q6P4A7 337 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 ODF3L1Q8IXM7 274 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 FAM71E2Q8N5Q1 922 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 DRAM1Q8N682 238 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 C5orf56Q8N8D9 126 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 RNF152Q8N8N0 203 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 TSPAN14Q8NG11 270 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 OR4F17Q8NGA8 305 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 OR56B4Q8NH76 319 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 OR1L1Q8NH94 360 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 CCDC107Q8WV48 283 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 EAF1Q96JC9 268 aaPredicted RBP7.27□□□□□ -1.25
SMC1A-203ENST00000428014 OR4F4Q96R69 305 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 NKX3-1Q99801 234 aaPredicted RBP7.27□□□□□ -1.25
SMC1A-203ENST00000428014 CMSS1Q9BQ75 279 aaKnown RBP7.27□□□□□ -1.25
SMC1A-203ENST00000428014 AK3Q9UIJ7 227 aa7.27□□□□□ -1.25
SMC1A-203ENST00000428014 NOTCH1P46531 2555 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 NOTCH3Q9UM47 2321 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 TRBV6-7A0A0A0MS04 114 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 MEX3AA1L020 520 aaKnown RBP7.26□□□□□ -1.25
SMC1A-203ENST00000428014 AP4M1O00189 453 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 PEX14O75381 377 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 FBXO24O75426 580 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 NDUFA3O95167 84 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 IGF1P05019 195 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 CD3GP09693 182 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 CD36P16671 472 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 TMEM11P17152 192 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 VEGFCP49767 419 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 CRIP2P52943 208 aaPredicted RBP7.26□□□□□ -1.25
SMC1A-203ENST00000428014 KRTAP10-3P60369 221 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 BLCAPP62952 87 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 MSMO1Q15800 293 aa7.26□□□□□ -1.25
SMC1A-203ENST00000428014 NR2C2APQ86WQ0 139 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms