RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 RCC1P18754 421 aaPredicted RBP11.21□□□□□ -0.61
PDAP1-202ENST00000426447 ZP3P21754 424 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 CRIP2P52943 208 aaPredicted RBP11.21□□□□□ -0.61
PDAP1-202ENST00000426447 PPP3R1P63098 170 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 ADARB1P78563 741 aaKnown RBP11.21□□□□□ -0.61
PDAP1-202ENST00000426447 NDPQ00604 133 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 MRPL28Q13084 256 aaKnown RBP11.21□□□□□ -0.61
PDAP1-202ENST00000426447 DDI2Q5TDH0 399 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 MEDAGQ5VYS4 303 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 SYS1Q8N2H4 156 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 OR52L2PQ8NGH6 319 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 FAM110AQ9BQ89 295 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 SLA2Q9H6Q3 261 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 TAF9BQ9HBM6 251 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 TMEM138Q9NPI0 162 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 ZNF355PQ9NSJ1 428 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 FAM53CQ9NYF3 392 aa11.21□□□□□ -0.61
PDAP1-202ENST00000426447 CNOT2Q9NZN8 540 aaKnown RBP11.21□□□□□ -0.61
PDAP1-202ENST00000426447 EXOGQ9Y2C4 368 aaKnown RBP11.21□□□□□ -0.61
PDAP1-202ENST00000426447 A0A1W2PP11 408 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 FCN1O00602 326 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 RRHO14718 337 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 RGS11O94810 467 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 PPP1CCP36873 323 aaKnown RBP11.2□□□□□ -0.62
PDAP1-202ENST00000426447 OR3A3P47888 321 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 GPR176Q14439 515 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 AKIRIN2Q53H80 203 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 RAB12Q6IQ22 244 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 CD200R1LQ6Q8B3 271 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 ODF3L1Q8IXM7 274 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 LFNGQ8NES3 379 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 LGALS12Q96DT0 336 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 RDH12Q96NR8 316 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 CLCC1Q96S66 551 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 FAM103A1Q9BTL3 118 aaKnown RBP11.2□□□□□ -0.62
PDAP1-202ENST00000426447 AP4S1Q9Y587 144 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 PEX16Q9Y5Y5 336 aa11.2□□□□□ -0.62
PDAP1-202ENST00000426447 C13orf42A0A1B0GVH6 325 aa11.19□□□□□ -0.62
PDAP1-202ENST00000426447 ANKRD34BA5PLL1 514 aa11.19□□□□□ -0.62
PDAP1-202ENST00000426447 RBMY1BA6NDE4 496 aaKnown RBP11.19□□□□□ -0.62
PDAP1-202ENST00000426447 RBMY1EA6NEQ0 496 aaKnown RBP11.19□□□□□ -0.62
PDAP1-202ENST00000426447 GSTP1P09211 210 aaKnown RBP11.19□□□□□ -0.62
PDAP1-202ENST00000426447 RBMY1DP0C7P1 496 aaKnown RBP11.19□□□□□ -0.62
PDAP1-202ENST00000426447 EGR2P11161 476 aaPredicted RBP11.19□□□□□ -0.62
PDAP1-202ENST00000426447 BDKRB2P30411 391 aa11.19□□□□□ -0.62
PDAP1-202ENST00000426447 GNMTQ14749 295 aa11.19□□□□□ -0.62
PDAP1-202ENST00000426447 SLC25A30Q5SVS4 291 aa11.19□□□□□ -0.62
PDAP1-202ENST00000426447 LCN12Q6JVE5 192 aa11.19□□□□□ -0.62
PDAP1-202ENST00000426447 OR9G4Q8NGQ1 327 aa11.19□□□□□ -0.62
PDAP1-202ENST00000426447 GPR148Q8TDV2 347 aa11.19□□□□□ -0.62
PDAP1-202ENST00000426447 TMEM106AQ96A25 262 aa11.19□□□□□ -0.62
PDAP1-202ENST00000426447 HIPK2Q9H2X6 1198 aa11.19□□□□□ -0.62
PDAP1-202ENST00000426447 JPT1Q9UK76 154 aa11.19□□□□□ -0.62
PDAP1-202ENST00000426447 CEPT1Q9Y6K0 416 aa11.19□□□□□ -0.62
PDAP1-202ENST00000426447 UBE2QL1A1L167 161 aa11.18□□□□□ -0.62
PDAP1-202ENST00000426447 LY6G6CO95867 125 aa11.18□□□□□ -0.62
PDAP1-202ENST00000426447 TFAP2AP05549 437 aa11.18□□□□□ -0.62
PDAP1-202ENST00000426447 SNRPGP62308 76 aaKnown RBP11.18□□□□□ -0.62
PDAP1-202ENST00000426447 TATDN3Q17R31 274 aa11.18□□□□□ -0.62
PDAP1-202ENST00000426447 FAM131AQ6UXB0 335 aa11.18□□□□□ -0.62
PDAP1-202ENST00000426447 ZNF833PQ6ZTB9 187 aa11.18□□□□□ -0.62
PDAP1-202ENST00000426447 OR2AK2Q8NG84 335 aa11.18□□□□□ -0.62
PDAP1-202ENST00000426447 OAZ3Q9UMX2 235 aa11.18□□□□□ -0.62
PDAP1-202ENST00000426447 SAA2-SAA4A0A096LPE2 208 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 SHISA3A0PJX4 238 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 H7C2Y5 167 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 YPEL1O60688 119 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 CA11O75493 328 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 FADS2O95864 444 aaKnown RBP11.17□□□□□ -0.62
PDAP1-202ENST00000426447 MAS1P04201 325 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 SAA2P0DJI9 122 aaPredicted RBP11.17□□□□□ -0.62
PDAP1-202ENST00000426447 FCGR1AP12314 374 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 GTF2A1P52655 376 aaPredicted RBP11.17□□□□□ -0.62
PDAP1-202ENST00000426447 SYNJ2BPP57105 145 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 HTD2P86397 168 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 KLF5Q13887 457 aaPredicted RBP11.17□□□□□ -0.62
PDAP1-202ENST00000426447 Q8N402 240 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 GALMQ96C23 342 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 YPEL2Q96QA6 119 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 ZNF184Q99676 751 aaPredicted RBP11.17□□□□□ -0.62
PDAP1-202ENST00000426447 ERVK13-1Q9NX77 482 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 RCC2Q9P258 522 aaKnown RBP11.17□□□□□ -0.62
PDAP1-202ENST00000426447 AASSQ9UDR5 926 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 GAB2Q9UQC2 676 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 ORC6Q9Y5N6 252 aa11.17□□□□□ -0.62
PDAP1-202ENST00000426447 A0A0G2JLM5 398 aa11.16□□□□□ -0.62
PDAP1-202ENST00000426447 SAC3D1A6NKF1 404 aa11.16□□□□□ -0.62
PDAP1-202ENST00000426447 MC5RP33032 325 aa11.16□□□□□ -0.62
PDAP1-202ENST00000426447 RIPK1Q13546 671 aa11.16□□□□□ -0.62
PDAP1-202ENST00000426447 RNLSQ5VYX0 342 aa11.16□□□□□ -0.62
PDAP1-202ENST00000426447 ZNF562Q6V9R5 426 aa11.16□□□□□ -0.62
PDAP1-202ENST00000426447 C5orf24Q7Z6I8 188 aa11.16□□□□□ -0.62
PDAP1-202ENST00000426447 GAPTQ8N292 157 aa11.16□□□□□ -0.62
PDAP1-202ENST00000426447 RGP1Q92546 391 aaPredicted RBP11.16□□□□□ -0.62
PDAP1-202ENST00000426447 PLEKHA3Q9HB20 300 aa11.16□□□□□ -0.62
PDAP1-202ENST00000426447 PIPOXQ9P0Z9 390 aa11.16□□□□□ -0.62
PDAP1-202ENST00000426447 METTL1Q9UBP6 276 aaKnown RBP11.16□□□□□ -0.62
PDAP1-202ENST00000426447 TPPPO94811 219 aa11.15□□□□□ -0.62
PDAP1-202ENST00000426447 CNIH1O95406 144 aa11.15□□□□□ -0.62
PDAP1-202ENST00000426447 FUT3P21217 361 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms