RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 PRR18Q8N4B5 295 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 DTX3Q8N9I9 347 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 OR52M1Q8NGK5 317 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 TOMM40LQ969M1 308 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 PTX4Q96A99 478 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 RPEQ96AT9 228 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 RAB3CQ96E17 227 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 ABRACLQ9P1F3 81 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 HSF4Q9ULV5 492 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 SPATA2Q9UM82 520 aa10.13□□□□□ -0.79
GPC1-204ENST00000426280 METTL21EPA6NDL7 271 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 OOSP1A8MZH6 123 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 H3BUI4 141 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 MFNGO00587 321 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 OR2F2O95006 317 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 CSF1P09603 554 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 CEACAM3P40198 252 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 TMBIM6P55061 237 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 MADCAM1Q13477 382 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 THNSL2Q86YJ6 484 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 CROCCP3Q8IVE0 287 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 IZUMO1Q8IYV9 350 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 LINC00311Q8N616 119 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 SETD6Q8TBK2 473 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 RAB2BQ8WUD1 216 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 ISOC1Q96CN7 298 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 TAF9BQ9HBM6 251 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 CHMP1AQ9HD42 196 aaPredicted RBP10.12□□□□□ -0.79
GPC1-204ENST00000426280 MBNL3Q9NUK0 354 aaKnown RBP10.12□□□□□ -0.79
GPC1-204ENST00000426280 ETV7Q9Y603 341 aa10.12□□□□□ -0.79
GPC1-204ENST00000426280 IGHV1-3A0A0C4DH29 117 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 H3BMQ9 156 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 HSD17B6O14756 317 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 CA11O75493 328 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 NAPSAO96009 420 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 IGKV1D-33P01593 117 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 IGKV1-33P01594 117 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 HIST1H1DP16402 221 aaKnown RBP10.11□□□□□ -0.79
GPC1-204ENST00000426280 VDAC2P45880 294 aaPredicted RBP10.11□□□□□ -0.79
GPC1-204ENST00000426280 RORCP51449 518 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 SCAND1P57086 179 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 ZNF816Q0VGE8 651 aaPredicted RBP10.11□□□□□ -0.79
GPC1-204ENST00000426280 MORN2Q502X0 79 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 C11orf88Q6PI97 169 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 MOB3BQ86TA1 216 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 SAMD12Q8N8I0 201 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 OR5AU1Q8NGC0 362 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 OR10X1Q8NGY0 326 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 RITA1Q96K30 269 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 CMSS1Q9BQ75 279 aaKnown RBP10.11□□□□□ -0.79
GPC1-204ENST00000426280 RBM38Q9H0Z9 239 aaKnown RBP10.11□□□□□ -0.79
GPC1-204ENST00000426280 COMMD3Q9UBI1 195 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 LINC00527Q9UJ94 153 aa10.11□□□□□ -0.79
GPC1-204ENST00000426280 TET2Q6N021 2002 aaPredicted RBP10.11□□□□□ -0.79
GPC1-204ENST00000426280 CCDC160A6NGH7 325 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 FBXO24O75426 580 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 PTHLHP12272 177 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 MNDAP41218 407 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 CD83Q01151 205 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 EBI3Q14213 229 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 CDNFQ49AH0 187 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 C9orf152Q5JTZ5 239 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 C6orf183Q5T699 404 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 ZNF880Q6PDB4 577 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 SLC25A48Q6ZT89 311 aaKnown RBP10.1□□□□□ -0.79
GPC1-204ENST00000426280 C16orf82Q7Z2V1 217 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 ODF3L1Q8IXM7 274 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 Q8N6K4 173 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 C5orf56Q8N8D9 126 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 MAFIPQ8WZ33 124 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 CREB3L1Q96BA8 519 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 EAF1Q96JC9 268 aaPredicted RBP10.1□□□□□ -0.79
GPC1-204ENST00000426280 PARP12Q9H0J9 701 aaKnown RBP10.1□□□□□ -0.79
GPC1-204ENST00000426280 PLSCR3Q9NRY6 295 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 AMMECR1Q9Y4X0 333 aaPredicted RBP10.1□□□□□ -0.79
GPC1-204ENST00000426280 WNK1Q9H4A3 2382 aa10.1□□□□□ -0.79
GPC1-204ENST00000426280 TRAV18A0A075B6X5 111 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 A0A1W2PRX2 142 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 TMEM235A6NFC5 223 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 G3V4G9 280 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 HPGDSO60760 199 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 NOL3O60936 208 aaKnown RBP10.09□□□□□ -0.79
GPC1-204ENST00000426280 TMEM127O75204 238 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 GAPDHP04406 335 aaKnown RBP10.09□□□□□ -0.79
GPC1-204ENST00000426280 EIF4EP06730 217 aaKnown RBP10.09□□□□□ -0.79
GPC1-204ENST00000426280 CD3GP09693 182 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 FAM106CPP0CH98 169 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 ZNF182P17025 639 aaPredicted RBP10.09□□□□□ -0.79
GPC1-204ENST00000426280 TMEM11P17152 192 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 PPP1CCP36873 323 aaKnown RBP10.09□□□□□ -0.79
GPC1-204ENST00000426280 RAB7AP51149 207 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 ARFRP1Q13795 201 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 HES1Q14469 280 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 HMGN3Q15651 99 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 C2orf68Q2NKX9 166 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 ZNF260Q3ZCT1 412 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 ARSJQ5FYB0 599 aaPredicted RBP10.09□□□□□ -0.79
GPC1-204ENST00000426280 UBE2NLQ5JXB2 153 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 OR8H3Q8N146 312 aa10.09□□□□□ -0.79
GPC1-204ENST00000426280 C8orf31Q8N9H6 132 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms