RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 AQP7O14520 342 aa9.05□□□□□ -0.96
CUX1-205ENST00000425244 LY86O95711 162 aa9.05□□□□□ -0.96
CUX1-205ENST00000425244 ZNF16P17020 682 aaPredicted RBP9.05□□□□□ -0.96
CUX1-205ENST00000425244 UCP1P25874 307 aa9.05□□□□□ -0.96
CUX1-205ENST00000425244 S100GP29377 79 aa9.05□□□□□ -0.96
CUX1-205ENST00000425244 RUNX1Q01196 453 aa9.05□□□□□ -0.96
CUX1-205ENST00000425244 ZNF154Q13106 437 aa9.05□□□□□ -0.96
CUX1-205ENST00000425244 NMSQ5H8A3 153 aa9.05□□□□□ -0.96
CUX1-205ENST00000425244 PCSK4Q6UW60 755 aa9.05□□□□□ -0.96
CUX1-205ENST00000425244 UNQ6494/PRO21346Q6UXR6 183 aa9.05□□□□□ -0.96
CUX1-205ENST00000425244 NEU1Q99519 415 aa9.05□□□□□ -0.96
CUX1-205ENST00000425244 KCNJ16Q9NPI9 418 aa9.05□□□□□ -0.96
CUX1-205ENST00000425244 MPC1Q9Y5U8 109 aa9.05□□□□□ -0.96
CUX1-205ENST00000425244 COLCA2A8K830 154 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 HSPA12AO43301 675 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 PITX3O75364 302 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 HEXAP06865 529 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 PSG2P11465 335 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 IDH3GP51553 393 aaPredicted RBP9.04□□□□□ -0.96
CUX1-205ENST00000425244 ERVS71-1P61550 626 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 HLA-DRB3P79483 266 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 FBXW9Q5XUX1 488 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 CYB5R2Q6BCY4 276 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 MYPOPQ86VE0 399 aaPredicted RBP9.04□□□□□ -0.96
CUX1-205ENST00000425244 RPRMLQ8N4K4 120 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 COMMD1Q8N668 190 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 NANOS1Q8WY41 292 aaKnown RBP9.04□□□□□ -0.96
CUX1-205ENST00000425244 ZCCHC14Q8WYQ9 949 aaKnown RBP9.04□□□□□ -0.96
CUX1-205ENST00000425244 RARRES2Q99969 163 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 PBDC1Q9BVG4 233 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 RIMS4Q9H426 269 aaPredicted RBP9.04□□□□□ -0.96
CUX1-205ENST00000425244 OPA3Q9H6K4 179 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 KCNS2Q9ULS6 477 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 PPP1R3CQ9UQK1 317 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 OR2W1Q9Y3N9 320 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 A0A0G2JRQ6 117 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 C7orf77A4D0Y5 90 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 H0Y980 276 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 K7N7A8 449 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 SELEP16581 610 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 F2RP25116 425 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 CCL20P78556 96 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 HMGN3Q15651 99 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 SRSF7Q16629 238 aaKnown RBP eCLIP9.04□□□□□ -0.961e-8■■■■■ 28.4
CUX1-205ENST00000425244 KRBOX4Q5JUW0 171 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 BCL2L2Q92843 193 aaPredicted RBP9.04□□□□□ -0.96
CUX1-205ENST00000425244 LURAP1Q96LR2 239 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 OR51I2Q9H344 312 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 C11orf1Q9H5F2 150 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 RNF122Q9H9V4 155 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 DKK4Q9UBT3 224 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 PKD1L2Q7Z442 2459 aa9.04□□□□□ -0.96
CUX1-205ENST00000425244 ARHGAP21Q5T5U3 1957 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 PRR14LQ5THK1 2151 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 CRYABP02511 175 aaKnown RBP9.03□□□□□ -0.96
CUX1-205ENST00000425244 SNRPEP62304 92 aaKnown RBP9.03□□□□□ -0.96
CUX1-205ENST00000425244 FOXF2Q12947 444 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 IL24Q13007 206 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 TBC1D28Q2M2D7 210 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 RNF212Q495C1 297 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 ZNF324BQ6AW86 544 aaPredicted RBP9.03□□□□□ -0.96
CUX1-205ENST00000425244 SLC25A24Q6NUK1 477 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 C9orf106Q8NAJ2 232 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 OR5D13Q8NGL4 314 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 PLPPR1Q8TBJ4 325 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 TCEAL7Q9BRU2 100 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 SCRT1Q9BWW7 348 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 OR2J1Q9GZK6 312 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 TREM2Q9NZC2 230 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 TRAPPC2LQ9UL33 140 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 J3QT63 122 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 LYZL6O75951 148 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 CNOT4O95628 575 aaKnown RBP9.03□□□□□ -0.96
CUX1-205ENST00000425244 RD3LP0DJH9 198 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 UCNP55089 124 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 TMEM267Q0VDI3 215 aaPredicted RBP9.03□□□□□ -0.96
CUX1-205ENST00000425244 HAGHQ16775 308 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 VWA1Q6PCB0 445 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 Q8NA96 180 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 CA5BP1Q8WTZ4 195 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 SLC35B3Q9H1N7 401 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 TAAR3PQ9P1P4 343 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 PUS1Q9Y606 427 aaKnown RBP eCLIP9.03□□□□□ -0.96
CUX1-205ENST00000425244 DIDO1Q9BTC0 2240 aaKnown RBP9.03□□□□□ -0.96
CUX1-205ENST00000425244 CACNA1DQ01668 2161 aa9.03□□□□□ -0.96
CUX1-205ENST00000425244 A0A1W2PPH5 198 aa9.02□□□□□ -0.96
CUX1-205ENST00000425244 A6NLC8 198 aa9.02□□□□□ -0.96
CUX1-205ENST00000425244 CDIPTO14735 213 aa9.02□□□□□ -0.96
CUX1-205ENST00000425244 GRPP07492 148 aa9.02□□□□□ -0.96
CUX1-205ENST00000425244 UBE2NP61088 152 aaKnown RBP9.02□□□□□ -0.96
CUX1-205ENST00000425244 ID3Q02535 119 aa9.02□□□□□ -0.96
CUX1-205ENST00000425244 ALKBH6Q3KRA9 238 aa9.02□□□□□ -0.96
CUX1-205ENST00000425244 LINC00596Q86U02 117 aa9.02□□□□□ -0.96
CUX1-205ENST00000425244 H1FOOQ8IZA3 346 aaPredicted RBP9.02□□□□□ -0.96
CUX1-205ENST00000425244 OR10V1Q8NGI7 309 aa9.02□□□□□ -0.96
CUX1-205ENST00000425244 GPR146Q96CH1 333 aa9.02□□□□□ -0.96
CUX1-205ENST00000425244 SSX3Q99909 188 aa9.02□□□□□ -0.96
CUX1-205ENST00000425244 RTL8AQ9BWD3 113 aa9.02□□□□□ -0.96
CUX1-205ENST00000425244 CDH20Q9HBT6 801 aa9.02□□□□□ -0.96
CUX1-205ENST00000425244 OR14J1Q9UGF5 321 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms